Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq56 235 6e-57 seq55 132 5e-26 >seq56 Length=3289960 Score = 235 bits (260), Expect = 6e-57 Identities = 504/747 (67%), Gaps = 6/747 (1%) Strand=Plus/Plus Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGAC 53254 |||||||| || | ||||||||||| || ||| | | | | |||||| ||| || Sbjct 1939808 ATGCGCGTTGCTGTCGGTATCCACGGCGAGGACATCGAGAAGGCCATTGAGACCTACCAC 1939867 Query 53255 TTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAAT 53314 || ||| |||||||||||| || |||||| | || || || |||||||| | || Sbjct 1939868 TTGATGTCCCAAAAGTACTTCACCCACGCCTCCCCCACTCTCTTCAACGCCGCCACTCCC 1939927 Query 53315 CACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATC 53374 || || ||| | | ||||||||||| | ||| | ||| || || || ||| Sbjct 1939928 CAGCCCCAGCTTGCTTCTTGCTTCCTGGTCGACATGTCCGCAGACAGCATTGAGGGTATC 1939987 Query 53375 TACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC 53434 ||||| || || ||| ||||| || |||||| | ||||| || ||| | | Sbjct 1939988 TACGACACTCTTAAGACCTGTGCTATGATTTCCAAGACCGCTGGTGGCATTGGTTTGAA- 1940046 Query 53435 TGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATG 53492 || || | || ||||||| | ||| | || || || || ||| | || ||| Sbjct 1940047 TGTTC-ACCGCATCCGTGCCACCGGTTCCTACATTGGTGGAACCAATGGCTCCTCCAATG 1940105 Query 53493 GAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTG 53552 | || || ||||||||||| || ||||| ||||| ||||| ||||| ||||||||||| Sbjct 1940106 GTATTGTTCCTATGCTCCGTGTGTTCAATAACACTGCCCGCTACGTTGACCAGGGTGGTA 1940165 Query 53553 GGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGT 53612 |||||| || |||| ||||||||||| ||||| |||||||| || | | |||| Sbjct 1940166 ACAAGCGCCCTGGTGCGTTTGCCATCTACCTGGAGCCCTGGCACGCAGATGTCTTCGAGT 1940225 Query 53613 TTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TACA 53671 | ||||| || ||| ||| || ||| | ||||| | || ||| || || || ||| Sbjct 1940226 TCCTCGATCTCCGTAAGAACCACGGTAAGGAAGAAGTTCGTGCCCGGGATCTCTTCTAC- 1940284 Query 53672 GCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTG 53731 ||||| |||| ||| || || |||||| | || ||| ||| || ||| || Sbjct 1940285 GCTCTCTGGACTCCTGATCTGTTCATGAAGCGTGTTGAGGCTAACGGTGACTGGACTCTC 1940344 Query 53732 ATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATG 53791 | ||||| |||||| | | || ||| | |||||||||||| ||||| | | | Sbjct 1940345 TTCTGCCCCAACGAGGCCTCTGGTCTCGCTGATGTCTACGGTGATGAGTTCGAGGCTCTC 1940404 Query 53792 TATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATGG 53851 || || ||||| ||||||| | |||| | ||||| | || | ||| Sbjct 1940405 TACGAGAAGTACGAGAAGGAGGGCCGTGGCCGCAAGACCATTAAGGCTCAGAAGCTCTGG 1940464 Query 53852 GATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCG 53911 |||| || || || |||| ||||| || | || | |||| ||||||||| | Sbjct 1940465 TATGCCATTCTTGAGGCCCAGACTGAGACTGGTAACCCCTTCATGCTGTACAAGGATGCT 1940524 Query 53912 GTCAACGAGAAGAGCAACCAGAAGAAC 53938 |||| |||||||||||||||||||| Sbjct 1940525 TGCAACAAGAAGAGCAACCAGAAGAAC 1940551 Score = 116 bits (128), Expect = 4e-21 Identities = 303/452 (67%), Gaps = 19/452 (4%) Strand=Plus/Plus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 |||||| ||||| || || || ||||| || || || || ||||||| | ||| | Sbjct 1941077 CGCAACAGTCTGCTGGTCGCTCCCATGCCCACTGCCTCTACCAGTCAGATCCTCGGCTTC 1941136 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603 |||||| |||||||| ||||| | ||||||||| ||||| ||| || |||||| Sbjct 1941137 AACGAGTGCTTCGAGCCCTACACCTCGAACATCTACTCCCGCCGTGTCCTGGCCGGTGAG 1941196 Query 55604 TTTGTCATGATCAACAAGCAC---CTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAAC 55660 || || | || ||| | | ||| | |||||||| | || |||| | Sbjct 1941197 TTC--CAGG-TCGTCAACCCCTGGCTCCTGAAGGACCTTGTCGACCTCGGTTTGTGGTCC 1941253 Query 55661 CCGCAGATCAAGACGGATATTGT-GCGGAACGGGGGGTCCGTCCAGAATCTGG---AGAT 55716 | || |||| ||| | || || ||| || ||||||||||| | | || Sbjct 1941254 GACAACATGAAGAACCGTATCATCGCCGA-CGGCGGCTCCGTCCAGAACATCCCCAACAT 1941312 Query 55717 TCCTCTGCGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAG---AAGAGTC 55772 ||| | || | |||||| | ||| ||| || ||||| || | ||| || | | Sbjct 1941313 TCC-CGCCGACATCAAGGCCCTCTACAAGACCGTCTGGGAAATCTCCCAGCGTAACATCC 1941371 Query 55773 TGATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCT 55832 || | ||| || || || ||||| |||||||||||||||||||| ||||||||| Sbjct 1941372 TGC---AGATGGCCGCCGACCGCGGTGCCTACATCGACCAGTCCCAGTCCCTGAACATCC 1941428 Query 55833 TCATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGG 55892 | || || | || | ||| |||| | | ||| |||||||| ||| ||||||| || Sbjct 1941429 ACCTGAAGGAGCCCACCATGGGCAAGATCACCTCCATGCACTTCGCCGGCTGGAAGATGG 1941488 Query 55893 GACTCAAGACGGGTATGTACTATCTGCGGACC 55924 | || ||||| || |||||||| |||| ||| Sbjct 1941489 GTCTGAAGACCGGCATGTACTACTTGCGCACC 1941520 >seq55 Length=3282825 Score = 132 bits (146), Expect = 5e-26 Identities = 304/454 (67%), Gaps = 8/454 (2%) Strand=Plus/Plus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 ||||| |||||||| || ||||| || |||| || | ||| || ||||| | | ||| Sbjct 2906135 CCAGTGCCGATACCATCAGCACCGTTGATCAAGATGAGCGGGACCACAGGCATGAAGACT 2906194 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGG- 117270 |||||||| | || | |||||||||| | ||| |||| | | || | ||| Sbjct 2906195 TCAGGCTCAATCTTCTTACCGTCGTCCTCACCATACACCAGCAAGGGCTCATC-CGCGGT 2906253 Query 117271 ATCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGC 117330 || |||||| || | | || | | ||||||| |||||||||||| || ||| Sbjct 2906254 ATGGAATATCTTACGCGCAAATGGCGACAAGCGAGTGTAAATGTAACGAGCACTGGCACA 2906313 Query 117331 ATCCTTGCCACCAGC---AAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAG 117387 ||| ||||||| | ||| || ||||||| | |||||| ||||||| | || | Sbjct 2906314 ATC---GCCACCACCCTGAAGTCGACTACCGAAGTTTCCACTAGGCTCCAGGCAATTGAC 2906370 Query 117388 GTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTC 117447 |||||||| ||| ||||| | ||||| | ||| || || |||||| | | || Sbjct 2906371 GTTGTTGGAGCCGACAAAAGTCTGAGCAAGACCGACGATTGTCTGCTGGAGGGACACGTC 2906430 Query 117448 ACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTC 117507 ||| ||||| || || ||| | | |||| || |||| | | |||||||| || Sbjct 2906431 ACCGTGGTGGTAGGCTGTCATTCCAGAGACGTGACCTGCCAATTCCACGACCTTCATATC 2906490 Query 117508 TGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACC 117567 | | || || || |||| ||| | |||||||||||||| ||||||| ||| Sbjct 2906491 CTTCTTAAGATTGCGACGGAAACAGGTATACAGCACCTTGCGCTGACCGGGCTTCAAACC 2906550 Query 117568 ATCCGCCACGTGAGGGATCGAACGCTTGATGTCC 117601 ||| | || || || || ||| || ||||| Sbjct 2906551 ATCAACGACAGACGGAATGGAGCGCATGTTGTCC 2906584 Score = 96.9 bits (106), Expect = 4e-15 Identities = 296/454 (65%), Gaps = 8/454 (2%) Strand=Plus/Plus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 || || ||||| || || |||||||||| || || | ||| || | ||| | | | Sbjct 2906135 CCAGTGCCGATACCATCAGCACCGTTGATCAAGATGAGCGGGACCACAGGCATGAAGACT 2906194 Query 151936 TCCGGCTCCACCTGTTGACCGTCATCCATCACG-TATTTCAAAACGGAATTGTCAGCCGG 151994 || ||||| | || | |||||| ||| |||| || || | || | || || | Sbjct 2906195 TCAGGCTCAATCTTCTTACCGTCGTCC-TCACCATACACCAGCAAGGGCTCATCCGCGGT 2906253 Query 151995 ATCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCCGC 152054 || ||||||| || | | || ||| || ||| | ||||| || | ||||| Sbjct 2906254 ATGGAATATCTTACGCGCAAATGGCGACAAGCGAGTGTAAATGTAACGAGCACTGGCACA 2906313 Query 152055 ATCCTTGCCACCTGCC---AGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAG 152111 ||| |||||| || || || | || || | |||| ||||| ||| |||| Sbjct 2906314 ATC---GCCACCACCCTGAAGTCGACTACCGAAGTTTCCACTAGGCTCCAGGCAATTGAC 2906370 Query 152112 GTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTC 152171 |||||||| ||| || ||| ||||||| | | || || || ||| || | | || Sbjct 2906371 GTTGTTGGAGCCGACAAAAGTCTGAGCAAGACCGACGATTGTCTGCTGGAGGGACACGTC 2906430 Query 152172 ACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTC 152231 ||||||||| || || ||| | | || || || ||||| | | | |||||||| || Sbjct 2906431 ACCGTGGTGGTAGGCTGTCATTCCAGAGACGTGACCTGCCAATTCCACGACCTTCATATC 2906490 Query 152232 CGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACC 152291 | || | || || || ||||| || | |||||||||||| || |||||||| Sbjct 2906491 CTTCTTAAGATTGCGACGGAAACAGGTATACAGCACCTTGCGCTGACCGGGCTTCAAACC 2906550 Query 152292 GTCCACCACGTGAGGAATCGAACGCTTGATGTCC 152325 || || || ||||| || ||| || ||||| Sbjct 2906551 ATCAACGACAGACGGAATGGAGCGCATGTTGTCC 2906584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215555387000