Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03-
04] 65 sequences; 34,374,118 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq2 176 5e-39
seq61 143 3e-29
seq55 123 3e-23
seq12 93.3 5e-14
seq56 87.8 2e-12
>seq2
Length=3819764
Score = 176 bits (194), Expect = 5e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| || ||||| || ||||| ||||| || |||||||| ||||||||
Sbjct 1934166 ATGCAAATCTTCGTAAAGACCCTCACCGGAAAGACCATCACTCTTGAAGTTGAGTCTTCC 1934225
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||| | || |||||||| |||||||| || ||||| ||||||
Sbjct 1934226 GACACCATCGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCTCCCGACCAG 1934285
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || || || ||||| || ||||||| ||| || || | ||||| ||
Sbjct 1934286 CAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGATGGTCGCACTCTCTCCGACTACAAC 1934345
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| |||||||| ||||| ||| | || || || |||||
Sbjct 1934346 ATCCAGAAGGAGTCCACTCTCCATCTCGTCCTCCGCCTCCGTGGTGG 1934392
Score = 170 bits (188), Expect = 2e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || ||||| || ||||| ||||| || ||||| ||||| |||||
Sbjct 1934394 ATGCAAATTTTCGTGAAGACCCTCACCGGAAAGACCATCACTCTGGAGGTAGAGTCGTCG 1934453
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | || | ||| | || || ||||| ||||| || || || || ||||||
Sbjct 1934454 GATACCATCGATAACGTCAAGTCAAAGATCCAGGATAAGGAAGGCATCCCCCCTGACCAG 1934513
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||||| || ||||| |||||||| || ||||||| || ||||| | ||||| ||
Sbjct 1934514 CAACGTCTTATCTTTGCCGGTAAGCAGCTTGAGGATGGCCGCACCCTGTCCGACTACAAC 1934573
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
||||||||||||||||||| || || ||| | ||||| || |||||
Sbjct 1934574 ATCCAAAAGGAATCCACTCTGCACCTTGTCCTCCGTCTCCGTGGTGG 1934620
Score = 158 bits (174), Expect = 1e-33
Identities = 159/204 (78%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
||||||||||| || ||||||||||||||||| || | ||| | ||| | ||| |
Sbjct 1933962 ACCGGCAAGACCATCACTCTTGAGGTTGAGTCTTCCGACACCATCGACAATGTCAAGTCC 1934021
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| |||||||| ||||| || |||||||| ||||||||||| || ||||| || || |||
Sbjct 1934022 AAGATTCAGGATAAGGAAGGCATTCCTCCTGACCAGCAGCGCCTGATTTTCGCAGGCAAG 1934081
Query 27550 CAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608
|| || ||||||| |||||||| ||| ||||| || | || ||||| ||||| |||||
Sbjct 1934082 CAGCTTGAGGATGGCCGTACCCTGAGC-GACTACAACATTCAGAAGGAGTCCACCCTTCA 1934140
Query 27609 TCTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||| | || || || |||||
Sbjct 1934141 CCTTGTCCTCCGCCTCCGTGGTGG 1934164
Score = 140 bits (154), Expect = 4e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||||||||| || || |||||||| || || || || || || ||| |
Sbjct 1934622 ATGCAAATTTTTGTCAAGACACTCACTGGCAAGACCATCACGCTGGAAGTGGAATCATCT 1934681
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| || || |||||||||||||| || || |||||||||
Sbjct 1934682 GACACGATCGACAACGTTAAGAGCAAGATCCAGGACAAGGAGGGTATCCCCCCAGACCAG 1934741
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || || |||||||| || ||||| | || ||||| | ||||| |||
Sbjct 1934742 CAGCGTCTTATCTTCGCCGGTAAGCAGCTGGAGGACGGGCGCACCCTTTCTGACTACAAT 1934801
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
|||| ||||| || || || | || | ||||| || ||||| ||
Sbjct 1934802 ATCCAGAAGGAGAGTACCCTGCACTTGGTGCTCCGTCTGCGTGGTGGTCA 1934851
>seq61
Length=2613024
Score = 143 bits (158), Expect = 3e-29
Identities = 332/497 (67%), Gaps = 9/497 (2%)
Strand=Plus/Plus
Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGATGAAT---CGTGGGTCGTCGTTTGGTCAGCGT 64719
|| ||||| || ||||||||||| ||||| ||| || |||| | || | | ||||
Sbjct 817912 AAGAAGGCCGAGTGGGCCATCCGTTGGATCAATGACACTGAGTCGACCTTCGCTTCGCGT 817971
Query 64720 CTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTC 64779
|| | || || || ||| || || || ||||| ||||| || ||| || || |||
Sbjct 817972 CTGGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGTTCCTTCGCCTCCATCTTC 818031
Query 64780 TGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGG 64839
||||| || ||||| || |||||||| ||||| | || || ||||| || || |||||
Sbjct 818032 TGGCTCAAGAAGCGTGGTCTGATGCCCGGTCTCACCTTCTCCAACGAACTCATTTCTCGT 818091
Query 64840 GACGAGGGGCTCCACCAAGAATTTGCGGTTACCCTGTTCAGCCACCTCAAGGACAAACC- 64898
|||||||| |||||| || || || | ||| ||| ||||| || || ||
Sbjct 818092 GACGAGGGTCTCCACACTGATTTCGCTTGTCTCCTCTTCTCTCACCTGAACCACCGCCCT 818151
Query 64899 -ATCACATGGGACTATAATTGAT-ATAGTAAAATCGGCTGTAGAAATTGAAAAGGAATTC 64956
||| || || | || || || || | ||| || | || || |||| |||
Sbjct 818152 GATCCCAAGGTCGTTGAAGACATCATTGTCGA---GGCCGTTGGTATCGAGCAGGAGTTC 818208
Query 64957 ATTACTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGCCGATAAGATGAAACAGTAT 65016
| |||| ||| ||||| ||| | || | |||||| | ||| | ||| |||||
Sbjct 818209 CTCACTGACGCTCTTCCCTGTGGCCTGCTTGGCATGAACGCCAAGCTCATGTGCCAGTAC 818268
Query 65017 ATCGAATTTGTAGCAGATCGCCTGCTTACTCAGTTTGGTATTAAGCCCTACTGGAATTCT 65076
||||| ||||| || || || || || |||| | ||| |||| || |||
Sbjct 818269 ATCGAGTTTGTCGCTGACCGTCTCCTCGTGGCCCTTGGCAACAAGAAGTACTACAACTCT 818328
Query 65077 TCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGGAAGACTAACTTTTTTGAA 65136
| || || || |||| |||||| | ||| ||||| || ||||| ||||| || ||
Sbjct 818329 GCCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAACTTCTTCGAG 818388
Query 65137 AAGAGGGTAGGTGATTA 65153
||| | || ||||| ||
Sbjct 818389 AAGCGTGTCGGTGACTA 818405
>seq55
Length=3282825
Score = 123 bits (136), Expect = 3e-23
Identities = 140/185 (76%), Gaps = 2/185 (1%)
Strand=Plus/Minus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| |||||||| || || || ||||| ||||| || || || ||||| | || | |||
Sbjct 2334011 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 2333952
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| || | ||| | || || |||||||||||||| ||||| || ||||||||||| ||
Sbjct 2333951 GACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCGCCTG 2333892
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAA 27593
|| || || || ||||| |||||||||| || ||||| ||| ||||| || |||| ||
Sbjct 2333891 ATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGC-GACTACAACATCCAGAA 2333833
Query 27594 GGAAT 27598
|| ||
Sbjct 2333832 GGTAT 2333828
>seq12
Length=2198207
Score = 93.3 bits (102), Expect = 5e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
||||||||||| || || || ||||||||||| || || || || || ||||| ||||||
Sbjct 1200290 GACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 1200349
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|| | || || || | ||||| || |||| ||||| || || ||||| || ||| |
Sbjct 1200350 GACGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTCCTC 1200409
Query 27619 CGTCTTCGCGGTGG 27632
|| || || |||||
Sbjct 1200410 CGCCTGCGTGGTGG 1200423
>seq56
Length=3289960
Score = 87.8 bits (96), Expect = 2e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097
|| |||| ||||||||||| ||||| || ||| ||||||||||| | |||||| ||
Sbjct 1941519 GTGCGCAAGTAGTACATGCCGGTCTTCAGACCCATCTTCCAGCCGGCGAAGTGCATGGAG 1941460
Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157
||| ||| | | ||||| | || || | ||||||||| ||||| ||||| ||||
Sbjct 1941459 GTGATCTTGCCCATGGTGGGCTCCTTCAGGTGGATGTTCAGGGACTGGGACTGGTCGATG 1941400
Query 80158 AAAGCCCCACGATCTGCCGCCAT 80180
| || || || || || |||||
Sbjct 1941399 TAGGCACCGCGGTCGGCGGCCAT 1941377
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570309936622800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |