Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq2 109 3e-19 >seq2 Length=3819764 Score = 109 bits (120), Expect = 3e-19 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||||| || || || |||||||| || || || || || ||||| || ||| Sbjct 1934839 AGACGGAGCACCAAGTGCAGGGTACTCTCCTTCTGGATATTGTAGTCAGAAAGGGTGCGC 1934780 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || || || |||||||| || || | |||||| ||||| || || | |||||| Sbjct 1934779 CCGTCCTCCAGCTGCTTACCGGCGAAGATAAGACGCTGCTGGTCTGGGGGGATACCCTCC 1934720 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||| || | |||||| | || ||||| |||||||||| || Sbjct 1934719 TTGTCCTGGATC-TTGCTCTTAACGTTGTCGATCGTGTCAGATGATTCCACTTCCAGCGT 1934661 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || || | || || |||||||| ||||| Sbjct 1934660 GATGGTCTTGCCAGTGAGTGTCTTGACAAAAATTTGCAT 1934622 Score = 82.4 bits (90), Expect = 5e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || |||||| |||||||| ||||| || || || || || || | || ||||| || Sbjct 1934596 TGCAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGC 1934537 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 ||||||||||| || | ||| || ||||| || || | || ||||| || |||| || Sbjct 1934536 TTACCGGCAAAGATAAGACGTTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGGATC-TT 1934478 Query 34624 TGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 || || ||| || || || || ||| || |||| || || || || ||||| Sbjct 1934477 TGACTTGACGTTATCGATGGTATCCGACGACTCTACCTCCAGAGTGATGGTCTTTCCGGT 1934418 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 | || ||||| ||||| ||||| Sbjct 1934417 GAGGGTCTTCACGAAAATTTGCAT 1934394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729350675145