Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03-
04] 65 sequences; 34,374,118 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq2 109 3e-19
>seq2
Length=3819764
Score = 109 bits (120), Expect = 3e-19
Identities = 157/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | |||||| || || || |||||||| || || || || || ||||| || |||
Sbjct 1934839 AGACGGAGCACCAAGTGCAGGGTACTCTCCTTCTGGATATTGTAGTCAGAAAGGGTGCGC 1934780
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
|||| || || || |||||||| || || | |||||| ||||| || || | ||||||
Sbjct 1934779 CCGTCCTCCAGCTGCTTACCGGCGAAGATAAGACGCTGCTGGTCTGGGGGGATACCCTCC 1934720
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| |||| || | |||||| | || ||||| |||||||||| ||
Sbjct 1934719 TTGTCCTGGATC-TTGCTCTTAACGTTGTCGATCGTGTCAGATGATTCCACTTCCAGCGT 1934661
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || || || | || || |||||||| |||||
Sbjct 1934660 GATGGTCTTGCCAGTGAGTGTCTTGACAAAAATTTGCAT 1934622
Score = 82.4 bits (90), Expect = 5e-11
Identities = 142/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
|| |||||| |||||||| ||||| || || || || || || | || ||||| ||
Sbjct 1934596 TGCAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGC 1934537
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
||||||||||| || | ||| || ||||| || || | || ||||| || |||| ||
Sbjct 1934536 TTACCGGCAAAGATAAGACGTTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGGATC-TT 1934478
Query 34624 TGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
|| || ||| || || || || ||| || |||| || || || || |||||
Sbjct 1934477 TGACTTGACGTTATCGATGGTATCCGACGACTCTACCTCCAGAGTGATGGTCTTTCCGGT 1934418
Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706
| || ||||| ||||| |||||
Sbjct 1934417 GAGGGTCTTCACGAAAATTTGCAT 1934394
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729350675145
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |