Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq2 107 2e-18 >seq2 Length=3819764 Score = 107 bits (118), Expect = 2e-18 Identities = 153/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || || ||||| || || ||||| || || | ||| || || |||| || Sbjct 1934831 CACCAAGTGCAGGGTACTCTCCTTCTGGATATTGTAGTCAGAAAGGGTGCGCCCGTCCTC 1934772 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| || || || || ||||||||||||||||| | ||| | | ||| |||||| Sbjct 1934771 CAGCTGCTTACCGGCGAAGATAAGACGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTG 1934712 Query 39195 GAT-TTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTT 39252 ||| || || || | ||| | | | ||| || || ||||| |||| |||||| | Sbjct 1934711 GATCTTGCTCTT--AACGTTGTCGATCGTGTCAGATGATTCCACTTCCAGCGTGATGGTC 1934654 Query 39253 TTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || || || || ||||| |||||||| Sbjct 1934653 TTGCCAGTGAGTGTCTTGACAAAAATTTGCAT 1934622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429545259719345