Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq55 98.7 8e-16 seq6 86.0 5e-12 >seq55 Length=3282825 Score = 98.7 bits (108), Expect = 8e-16 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 29654 TCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCT 29713 || |||||||| |||||||| |||||||| |||| |||||| | || || || | Sbjct 1627643 TCAACGTGGTCGAGGTAGACATGAGCATCGCCCATGGTGTGAATAAGGGTGCCGGGGTGG 1627584 Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 || ||| ||||||| | || | ||||| |||| |||| ||||||||| |||||| Sbjct 1627583 AGATCGGCAGCGTGAGCAAGGATATGAGTGAGAAGAGCGTAGGAGGCGATGTTGAAGGGC 1627524 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAG 29820 || || || |||| || | || |||||||||||| || ||||| Sbjct 1627523 ACACCAAGACCCACATCACAGGATCTCTGGTAGAGCACACAAGAGAG 1627477 >seq6 Length=642664 Score = 86.0 bits (94), Expect = 5e-12 Identities = 136/187 (73%), Gaps = 10/187 (5%) Strand=Plus/Plus Query 53489 AAGCTCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCA 53548 ||| |||||||||| | || | ||| ||| | || |||| || |||||||| || Sbjct 503442 AAGTTCGTCAAGGTCCGCATGCGTACCACCAAGATTCCCCAGATCGGTGACAAGTTCGCC 503501 Query 53549 TC-CTTCACGGCGCAAAAGGGGAC-ATGCGGAGCGGTCCTGAC--TCAGGAGGACATGCC 53604 || | |||||| || ||||| || || | | | || | ||||||||||||||| Sbjct 503502 TCTCGTCACGGT-CAGAAGGGTACCATTGGTAT---TACTTATCGTCAGGAGGACATGCC 503557 Query 53605 CTTCGACAAG-GACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCA 53663 |||| || | || || |||||||||||||| || |||||||||||||| |||| || Sbjct 503558 CTTC-ACTCGTGAAGGTGTGGTGCCCGACCTGATTATCAACCCCCACGCTATTCCTTCTC 503616 Query 53664 GGATGAC 53670 | ||||| Sbjct 503617 GAATGAC 503623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406162878242590