Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03-
04] 65 sequences; 34,374,118 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq55 98.7 8e-16
seq6 86.0 5e-12
>seq55
Length=3282825
Score = 98.7 bits (108), Expect = 8e-16
Identities = 122/167 (73%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 29654 TCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCT 29713
|| |||||||| |||||||| |||||||| |||| |||||| | || || || |
Sbjct 1627643 TCAACGTGGTCGAGGTAGACATGAGCATCGCCCATGGTGTGAATAAGGGTGCCGGGGTGG 1627584
Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773
|| ||| ||||||| | || | ||||| |||| |||| ||||||||| ||||||
Sbjct 1627583 AGATCGGCAGCGTGAGCAAGGATATGAGTGAGAAGAGCGTAGGAGGCGATGTTGAAGGGC 1627524
Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAG 29820
|| || || |||| || | || |||||||||||| || |||||
Sbjct 1627523 ACACCAAGACCCACATCACAGGATCTCTGGTAGAGCACACAAGAGAG 1627477
>seq6
Length=642664
Score = 86.0 bits (94), Expect = 5e-12
Identities = 136/187 (73%), Gaps = 10/187 (5%)
Strand=Plus/Plus
Query 53489 AAGCTCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCA 53548
||| |||||||||| | || | ||| ||| | || |||| || |||||||| ||
Sbjct 503442 AAGTTCGTCAAGGTCCGCATGCGTACCACCAAGATTCCCCAGATCGGTGACAAGTTCGCC 503501
Query 53549 TC-CTTCACGGCGCAAAAGGGGAC-ATGCGGAGCGGTCCTGAC--TCAGGAGGACATGCC 53604
|| | |||||| || ||||| || || | | | || | |||||||||||||||
Sbjct 503502 TCTCGTCACGGT-CAGAAGGGTACCATTGGTAT---TACTTATCGTCAGGAGGACATGCC 503557
Query 53605 CTTCGACAAG-GACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCA 53663
|||| || | || || |||||||||||||| || |||||||||||||| |||| ||
Sbjct 503558 CTTC-ACTCGTGAAGGTGTGGTGCCCGACCTGATTATCAACCCCCACGCTATTCCTTCTC 503616
Query 53664 GGATGAC 53670
| |||||
Sbjct 503617 GAATGAC 503623
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406162878242590
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |