Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03-
04] 65 sequences; 34,374,118 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq6 93.3 3e-14
seq55 89.7 4e-13
>seq6
Length=642664
Score = 93.3 bits (102), Expect = 3e-14
Identities = 137/187 (73%), Gaps = 8/187 (4%)
Strand=Plus/Plus
Query 48505 AAGCTCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGTGACAAGTTTGCG 48564
||| |||||||||| | || | ||| ||| | || |||| ||||||||||| ||
Sbjct 503442 AAGTTCGTCAAGGTCCGCATGCGTACCACCAAGATTCCCCAGATCGGTGACAAGTTCGCC 503501
Query 48565 TC-CTTCACGGCGCAAAAGGGGACATGTGGAGCCGTCCTGACC--CAGGAGGACATGCCC 48621
|| | |||||| || ||||| || ||| | || | | |||||||||||||||
Sbjct 503502 TCTCGTCACGGT-CAGAAGGGTACCATTGGTAT--TACTTATCGTCAGGAGGACATGCCC 503558
Query 48622 TTCGACAAG-GACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAG 48680
||| || | || || |||||||||||||| || |||||||||||||| |||| || |
Sbjct 503559 TTC-ACTCGTGAAGGTGTGGTGCCCGACCTGATTATCAACCCCCACGCTATTCCTTCTCG 503617
Query 48681 GATGACC 48687
||||||
Sbjct 503618 AATGACC 503624
>seq55
Length=3282825
Score = 89.7 bits (98), Expect = 4e-13
Identities = 120/167 (72%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 27148 TCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCT 27207
|| ||||| || |||||||| ||||| || |||| |||||| | || || || |
Sbjct 1627643 TCAACGTGGTCGAGGTAGACATGAGCATCGCCCATGGTGTGAATAAGGGTGCCGGGGTGG 1627584
Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267
|| ||| ||||||| | || | ||||| |||| |||| ||||||||| |||||
Sbjct 1627583 AGATCGGCAGCGTGAGCAAGGATATGAGTGAGAAGAGCGTAGGAGGCGATGTTGAAGGGC 1627524
Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAG 27314
|| || || |||| || | || |||||||||||| ||| |||||
Sbjct 1627523 ACACCAAGACCCACATCACAGGATCTCTGGTAGAGCACACAAGAGAG 1627477
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369506907281015
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |