Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq6 93.3 3e-14 seq55 89.7 4e-13 >seq6 Length=642664 Score = 93.3 bits (102), Expect = 3e-14 Identities = 137/187 (73%), Gaps = 8/187 (4%) Strand=Plus/Plus Query 48505 AAGCTCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGTGACAAGTTTGCG 48564 ||| |||||||||| | || | ||| ||| | || |||| ||||||||||| || Sbjct 503442 AAGTTCGTCAAGGTCCGCATGCGTACCACCAAGATTCCCCAGATCGGTGACAAGTTCGCC 503501 Query 48565 TC-CTTCACGGCGCAAAAGGGGACATGTGGAGCCGTCCTGACC--CAGGAGGACATGCCC 48621 || | |||||| || ||||| || ||| | || | | ||||||||||||||| Sbjct 503502 TCTCGTCACGGT-CAGAAGGGTACCATTGGTAT--TACTTATCGTCAGGAGGACATGCCC 503558 Query 48622 TTCGACAAG-GACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAG 48680 ||| || | || || |||||||||||||| || |||||||||||||| |||| || | Sbjct 503559 TTC-ACTCGTGAAGGTGTGGTGCCCGACCTGATTATCAACCCCCACGCTATTCCTTCTCG 503617 Query 48681 GATGACC 48687 |||||| Sbjct 503618 AATGACC 503624 >seq55 Length=3282825 Score = 89.7 bits (98), Expect = 4e-13 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 27148 TCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCT 27207 || ||||| || |||||||| ||||| || |||| |||||| | || || || | Sbjct 1627643 TCAACGTGGTCGAGGTAGACATGAGCATCGCCCATGGTGTGAATAAGGGTGCCGGGGTGG 1627584 Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 || ||| ||||||| | || | ||||| |||| |||| ||||||||| ||||| Sbjct 1627583 AGATCGGCAGCGTGAGCAAGGATATGAGTGAGAAGAGCGTAGGAGGCGATGTTGAAGGGC 1627524 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAG 27314 || || || |||| || | || |||||||||||| ||| ||||| Sbjct 1627523 ACACCAAGACCCACATCACAGGATCTCTGGTAGAGCACACAAGAGAG 1627477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369506907281015