Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03-
04] 65 sequences; 34,374,118 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq56 122 1e-22
>seq56
Length=3289960
Score = 122 bits (134), Expect = 1e-22
Identities = 729/1158 (63%), Gaps = 28/1158 (2%)
Strand=Plus/Minus
Query 76270 AAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCA---TATTGTAT 76326
||| || | ||| || | || ||||| || ||||||| || | ||| || | ||
Sbjct 1940647 AAGGGCAAGAGAAGCCAAGTTGCAAACAGCGACCTCATCAGGA---GCACTGTACTCGAT 1940591
Query 76327 TATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTT 76386
||||| ||||| || || | |||||||| || || | ||||||||||| ||
Sbjct 1940590 GATCTCAGTGCACAGGTTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTCTT 1940531
Query 76387 GTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAAT 76446
||| || | ||||| || || | || || | ||||| ||| |||| | || | |||
Sbjct 1940530 GTTGCAAGCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAAT 1940471
Query 76447 AGATTTCCAGACGACTCT-AGCTTTTATTATAGATTTGTATCGCTTCTCTCTTTCATA-T 76504
| | ||||| | ||| ||| || || | | || ||| | || || |
Sbjct 1940470 GGCATACCAGA-GCTTCTGAGCCTTAATGGTCTTGCGGCCACGGCCCTCCTTCTCGTACT 1940412
Query 76505 TGT-GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATT 76563
| | ||| | | || || || ||||| || | |||||| | | ||||| || ||
Sbjct 1940411 TCTCGTAGAGAGCC--TCGAACTCATCACCGTAGACATCAGCGAGACCAGAGGCCTCGTT 1940354
Query 76564 CGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTAT 76623
|| || | | | ||| ||||| | ||| ||| || ||||| || |||||||| |
Sbjct 1940353 GGGGCAGAAGAGAGTCCAGTCACCGTTAGCCTCAACACGCTTCATGAACAGATCAGGAGT 1940294
Query 76624 CCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAG 76683
||| ||||| || ||||| |||| | | |||||| || || ||||| ||
Sbjct 1940293 CCAGAGAGCGTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACCGTGGTTCTTACGGAG 1940234
Query 76684 ATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGG 76743
||| |||||||| | | ||| | ||||| || || || || || || | |||| ||
Sbjct 1940233 ATCGAGGAACTCGAAGACATCTGCGTGCCAGGGCTCCAGGTAGATGGCAAACGCACCAGG 1940174
Query 76744 TCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGG 76803
|| || ||||| ||||| || | || | |||||||||||| | || | | ||| ||
Sbjct 1940173 GCGCTTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTATTGAACACACGGAGCATAGG 1940114
Query 76804 AATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATT 76863
|| ||| || || || | ||||| |||||| ||| || || ||||| ||
Sbjct 1940113 AACAATACCATTGGAGGAGCCATTGGTTCCACCAATGTAGGAACCGGTGGCACGGATGCG 1940054
Query 76864 ACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGT 76923
|| | | || || || || || | || || || | ||||||| || | ||
Sbjct 1940053 GTGAACATTCAAACCAATGCCACCAGCGGTCTTGGAAATCATAGCACAGGTCTTAAGAGT 1939994
Query 76924 GTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTG 76983
||| ||||| ||||| || || || | ||||| | || || || || | ||
Sbjct 1939993 GTCGTAGATACCCTCAATGCTGTCTGCGGACATGTCGACCAGGAAGCAAGAAGCAAGCTG 1939934
Query 76984 ATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGA 77043
| || ||| | || || || | || || || || || ||||| | |||| ||
Sbjct 1939933 GGGCTGGGGAGTGGCGGCGTTGAAGAGAGTGGGGGAGGCGTGGGTGAAGTACTTTTGGGA 1939874
Query 77044 AAGTAGATTGTATGTTTCAATAACTGCTTCT--ATATCCCATTGATGAATTCCTACAGCG 77101
| | | ||| || ||||| | ||||| || ||| || || || |||||
Sbjct 1939873 CATCAAGTGGTAGGTCTCAATGGC--CTTCTCGATGTCCTCGCCGTGGATACCGACAGCA 1939816
Query 77102 ACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTAT 77161
|| ||||||| || ||||| || || || || | || || | | |||
Sbjct 1939815 ACGCGCATCAGCAGGTGCTGGGGACGCTCGGCAACACTGCCGTTGATACGGAGAAGATAT 1939756
Query 77162 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATA 77221
|| |||| || || ||||| || ||||||| ||||| | ||||| | |||
Sbjct 1939755 GAACGCTCCAGGGTCTTGAAACCGAAGAAGTTGTAGTTGAAGTCGCGGTCGTAGACAATG 1939696
Query 77222 ACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATCCATGACAGTGGT----AGAAAT 77277
|||| || || | || | ||| ||||||| || | |||| | ||| ||
Sbjct 1939695 GCCGAGTTAAGCTCATCGGCGTGTTTCATAACAATCTC----ATAGTGCTGTTGAGAGAT 1939640
Query 77278 AATTGGAG--ATCGTATTCCATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACG 77335
|| |||| | |||| ||||| || |||||||||| | | ||| || ||
Sbjct 1939639 CATAGGAGCAGGCTTATT--GTTTTTGGGGTTAACATAGTGGTAGAGGTCAGAGATGACC 1939582
Query 77336 TCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGA 77395
| ||| | |||||||| | |||||| || || || ||||| || | ||||| ||
Sbjct 1939581 ATGGAGAATTGCTTTTTTGTCTGCTTGTGGAGGTTGGAAACGGCAATACGGGCAGCCAGG 1939522
Query 77396 ATTGCATAGTCAGGATGT 77413
|| || ||||| || |||
Sbjct 1939521 ATGGCGTAGTCCGGGTGT 1939504
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712933820740800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |