Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq56 122 1e-22 >seq56 Length=3289960 Score = 122 bits (134), Expect = 1e-22 Identities = 729/1158 (63%), Gaps = 28/1158 (2%) Strand=Plus/Minus Query 76270 AAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCA---TATTGTAT 76326 ||| || | ||| || | || ||||| || ||||||| || | ||| || | || Sbjct 1940647 AAGGGCAAGAGAAGCCAAGTTGCAAACAGCGACCTCATCAGGA---GCACTGTACTCGAT 1940591 Query 76327 TATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTT 76386 ||||| ||||| || || | |||||||| || || | ||||||||||| || Sbjct 1940590 GATCTCAGTGCACAGGTTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTCTT 1940531 Query 76387 GTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAAT 76446 ||| || | ||||| || || | || || | ||||| ||| |||| | || | ||| Sbjct 1940530 GTTGCAAGCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAAT 1940471 Query 76447 AGATTTCCAGACGACTCT-AGCTTTTATTATAGATTTGTATCGCTTCTCTCTTTCATA-T 76504 | | ||||| | ||| ||| || || | | || ||| | || || | Sbjct 1940470 GGCATACCAGA-GCTTCTGAGCCTTAATGGTCTTGCGGCCACGGCCCTCCTTCTCGTACT 1940412 Query 76505 TGT-GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATT 76563 | | ||| | | || || || ||||| || | |||||| | | ||||| || || Sbjct 1940411 TCTCGTAGAGAGCC--TCGAACTCATCACCGTAGACATCAGCGAGACCAGAGGCCTCGTT 1940354 Query 76564 CGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTAT 76623 || || | | | ||| ||||| | ||| ||| || ||||| || |||||||| | Sbjct 1940353 GGGGCAGAAGAGAGTCCAGTCACCGTTAGCCTCAACACGCTTCATGAACAGATCAGGAGT 1940294 Query 76624 CCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAG 76683 ||| ||||| || ||||| |||| | | |||||| || || ||||| || Sbjct 1940293 CCAGAGAGCGTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACCGTGGTTCTTACGGAG 1940234 Query 76684 ATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGG 76743 ||| |||||||| | | ||| | ||||| || || || || || || | |||| || Sbjct 1940233 ATCGAGGAACTCGAAGACATCTGCGTGCCAGGGCTCCAGGTAGATGGCAAACGCACCAGG 1940174 Query 76744 TCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGG 76803 || || ||||| ||||| || | || | |||||||||||| | || | | ||| || Sbjct 1940173 GCGCTTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTATTGAACACACGGAGCATAGG 1940114 Query 76804 AATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATT 76863 || ||| || || || | ||||| |||||| ||| || || ||||| || Sbjct 1940113 AACAATACCATTGGAGGAGCCATTGGTTCCACCAATGTAGGAACCGGTGGCACGGATGCG 1940054 Query 76864 ACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGT 76923 || | | || || || || || | || || || | ||||||| || | || Sbjct 1940053 GTGAACATTCAAACCAATGCCACCAGCGGTCTTGGAAATCATAGCACAGGTCTTAAGAGT 1939994 Query 76924 GTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTG 76983 ||| ||||| ||||| || || || | ||||| | || || || || | || Sbjct 1939993 GTCGTAGATACCCTCAATGCTGTCTGCGGACATGTCGACCAGGAAGCAAGAAGCAAGCTG 1939934 Query 76984 ATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGA 77043 | || ||| | || || || | || || || || || ||||| | |||| || Sbjct 1939933 GGGCTGGGGAGTGGCGGCGTTGAAGAGAGTGGGGGAGGCGTGGGTGAAGTACTTTTGGGA 1939874 Query 77044 AAGTAGATTGTATGTTTCAATAACTGCTTCT--ATATCCCATTGATGAATTCCTACAGCG 77101 | | | ||| || ||||| | ||||| || ||| || || || ||||| Sbjct 1939873 CATCAAGTGGTAGGTCTCAATGGC--CTTCTCGATGTCCTCGCCGTGGATACCGACAGCA 1939816 Query 77102 ACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTAT 77161 || ||||||| || ||||| || || || || | || || | | ||| Sbjct 1939815 ACGCGCATCAGCAGGTGCTGGGGACGCTCGGCAACACTGCCGTTGATACGGAGAAGATAT 1939756 Query 77162 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATA 77221 || |||| || || ||||| || ||||||| ||||| | ||||| | ||| Sbjct 1939755 GAACGCTCCAGGGTCTTGAAACCGAAGAAGTTGTAGTTGAAGTCGCGGTCGTAGACAATG 1939696 Query 77222 ACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATCCATGACAGTGGT----AGAAAT 77277 |||| || || | || | ||| ||||||| || | |||| | ||| || Sbjct 1939695 GCCGAGTTAAGCTCATCGGCGTGTTTCATAACAATCTC----ATAGTGCTGTTGAGAGAT 1939640 Query 77278 AATTGGAG--ATCGTATTCCATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACG 77335 || |||| | |||| ||||| || |||||||||| | | ||| || || Sbjct 1939639 CATAGGAGCAGGCTTATT--GTTTTTGGGGTTAACATAGTGGTAGAGGTCAGAGATGACC 1939582 Query 77336 TCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGA 77395 | ||| | |||||||| | |||||| || || || ||||| || | ||||| || Sbjct 1939581 ATGGAGAATTGCTTTTTTGTCTGCTTGTGGAGGTTGGAAACGGCAATACGGGCAGCCAGG 1939522 Query 77396 ATTGCATAGTCAGGATGT 77413 || || ||||| || ||| Sbjct 1939521 ATGGCGTAGTCCGGGTGT 1939504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933820740800