Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq2 145 2e-29 >seq2 Length=3819764 Score = 145 bits (160), Expect = 2e-29 Identities = 166/221 (75%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| ||||| ||||| ||||| || ||||||||||| |||| | ||| | Sbjct 1934384 GAGGCGGAGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCG 1934325 Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 ||||| || || ||||| ||||||||||| || | ||||||||| | | ||| || Sbjct 1934324 ACCATCCTCAAGCTGCTTT--CCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCC 1934267 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| || ||||| || ||||| | || | | |||| ||| ||| ||||||||| Sbjct 1934266 TCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCAACTTCAAGA 1934207 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || ||||| ||||| ||||||| ||||| Sbjct 1934206 GTGATGGTCTTTCCGGTGAGGGTCTTTACGAAGATTTGCAT 1934166 Score = 125 bits (138), Expect = 2e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||||||||| || ||||| || || |||||||||||||| |||| | || | Sbjct 1934612 GAGACGGAGGACAAGGTGCAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAGGGTGCG 1934553 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || ||||| |||||||| | |||||||| | | ||| ||||| Sbjct 1934552 GCCATCCTCAAGCTGCTTACCGGCAAAGATAAGACGTTGCTGGTCAGGGGGGATGCCTTC 1934493 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || ||| ||||| | || | | | || || |||||| || ||||| Sbjct 1934492 CTTATCCTGGATCTTTGACTTGACGTTATCGATGGTATCCGACGACTCTACCTCCAGAGT 1934433 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || ||||| ||||||||||| | ||||| Sbjct 1934432 GATGGTCTTTCCGGTGAGGGTCTTCACGAAAATTTGCAT 1934394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153819839083615