Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03-
04] 65 sequences; 34,374,118 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq2 178 3e-39
seq56 116 9e-21
seq55 114 3e-20
seq12 84.2 5e-11
>seq2
Length=3819764
Score = 178 bits (196), Expect = 3e-39
Identities = 163/206 (79%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||||||||| || ||||| ||||| || ||||| || ||||| || || ||
Sbjct 1934397 CAAATTTTCGTGAAGACCCTCACCGGAAAGACCATCACTCTGGAGGTAGAGTCGTCGGAT 1934456
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| |||||| ||||| || ||||| ||||| || |||||||||
Sbjct 1934457 ACCATCGATAACGTCAAGTCAAAGATCCAGGATAAGGAAGGCATCCCCCCTGACCAGCAA 1934516
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| |||||||| ||||| || ||||| || ||||| | || || |||| || ||| ||
Sbjct 1934517 CGTCTTATCTTTGCCGGTAAGCAGCTTGAGGATGGCCGCACCCTGTCCGACTACAACATC 1934576
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
||||| ||||| || ||||| |||||
Sbjct 1934577 CAAAAGGAATCCACTCTGCACCTTGT 1934602
Score = 159 bits (176), Expect = 8e-34
Identities = 159/206 (77%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || ||||| ||||| || ||||| || || || || || |||
Sbjct 1934169 CAAATCTTCGTAAAGACCCTCACCGGAAAGACCATCACTCTTGAAGTTGAGTCTTCCGAC 1934228
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||||||||| || || || |||||||| ||||||||
Sbjct 1934229 ACCATCGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCTCCCGACCAGCAG 1934288
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||||||||| ||||| || ||||| | ||||| |||| || ||| ||
Sbjct 1934289 CGTCTCATCTTCGCCGGAAAGCAGCTTGAGGATGGTCGCACTCTCTCCGACTACAACATC 1934348
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || ||||| ||
Sbjct 1934349 CAGAAGGAGTCCACTCTCCATCTCGT 1934374
Score = 127 bits (140), Expect = 5e-24
Identities = 141/188 (75%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| || || || ||||| || || || ||||| || || |||||| || |||
Sbjct 1934625 CAAATTTTTGTCAAGACACTCACTGGCAAGACCATCACGCTGGAAGTGGAATCATCTGAC 1934684
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| || ||||| |||||||| || || ||||| || ||||||||
Sbjct 1934685 ACGATCGACAACGTTAAGAGCAAGATCCAGGACAAGGAGGGTATCCCCCCAGACCAGCAG 1934744
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| |||||||||||||| || ||||| || || || | || ||| | || || || ||
Sbjct 1934745 CGTCTTATCTTCGCCGGTAAGCAGCTGGAGGACGGGCGCACCCTTTCTGACTACAATATC 1934804
Query 178104 CAAAAAGA 178111
|| || ||
Sbjct 1934805 CAGAAGGA 1934812
Score = 109 bits (120), Expect = 1e-18
Identities = 135/185 (73%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004
|| || || || ||||| || ||||| || || ||||||||||| || |||||
Sbjct 1933962 ACCGGCAAGACCATCACTCTTGAGGTTGAGTCTTCCGACACCATCGACAATGTCAAGTCC 1934021
Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064
||||||||||| || ||||| || ||||| |||||||| || || || ||||| || ||
Sbjct 1934022 AAGATTCAGGATAAGGAAGGCATTCCTCCTGACCAGCAGCGCCTGATTTTCGCAGGCAAG 1934081
Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124
||||| || ||||| | || || ||| || ||| | || || || || || || ||
Sbjct 1934082 CAGCTTGAGGATGGCCGTACCCTGAGCGACTACAACATTCAGAAGGAGTCCACCCTTCAC 1934141
Query 178125 CTTGT 178129
|||||
Sbjct 1934142 CTTGT 1934146
>seq56
Length=3289960
Score = 116 bits (128), Expect = 9e-21
Identities = 186/266 (70%), Gaps = 6/266 (2%)
Strand=Plus/Minus
Query 214128 GTTTTTCTGGTTGCTTTT---GCGGCAAATGGCATCTTTGTATGCGATGAAAGGCATTCC 214184
||| ||||||||||| || | |||| ||||| ||||| ||||| || | ||
Sbjct 1940551 GTTCTTCTGGTTGCTCTTCTTGTTGCAA---GCATCCTTGTACAGCATGAAGGGGTTACC 1940495
Query 214185 CACCTCGACTTGAGCGACAAGAATGTGATGCCAGAGTTCTTGGGCCTTCACGACCTTTTT 214244
||| || || |||||||| || |||||| | || ||||| | | |||
Sbjct 1940494 AGTCTCAGTCTGGGCCTCAAGAATGGCATACCAGAGCTTCTGAGCCTTAATGGTCTTGCG 1940435
Query 214245 GGCTCTTCCCTCGTTTTCGTACTTTTCATAAAGAGACTCAAATTCCGAACCGTAGACATC 214304
| | | ||||| || |||||||| || || |||| ||| || || ||||||||||||
Sbjct 1940434 GCCACGGCCCTCCTTCTCGTACTTCTCGTAGAGAGCCTCGAACTCATCACCGTAGACATC 1940375
Query 214305 ATCAAGACCGGGAGCCTCGTTGGGGCAGAAAAGACTCCATTGTCCATTATCCCTGACTCT 214364
| | ||||| | ||||||||||||||||| ||| |||| | || ||| || || |
Sbjct 1940374 AGCGAGACCAGAGGCCTCGTTGGGGCAGAAGAGAGTCCAGTCACCGTTAGCCTCAACACG 1940315
Query 214365 TTTCATGAAAAGGTCGGAAGTCCAGA 214390
|||||||| || || | ||||||||
Sbjct 1940314 CTTCATGAACAGATCAGGAGTCCAGA 1940289
>seq55
Length=3282825
Score = 114 bits (126), Expect = 3e-20
Identities = 136/183 (74%), Gaps = 6/183 (3%)
Strand=Plus/Minus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985
|||||| || || || || || || || || |||||||| || || ||| |||||
Sbjct 2334012 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGC---GACAC 2333956
Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045
|||||| |||||||| ||||| |||||||| || || || || || |||||||| ||
Sbjct 2333955 CATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCG 2333896
Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105
|| ||||||||||| || |||||||| ||||| | || || ||| || ||| ||||
Sbjct 2333895 CCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 2333836
Query 178106 AAA 178108
||
Sbjct 2333835 GAA 2333833
>seq12
Length=2198207
Score = 84.2 bits (92), Expect = 5e-11
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073
||||| || || ||||| || |||||||| || || ||||||||||| || ||||||||
Sbjct 1200290 GACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 1200349
Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
|| || | |||||| | || || ||| |||| || || || || || || || ||
Sbjct 1200350 GACGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGT 1200405
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203730197517610
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |