Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03-
04] 62 sequences; 34,340,580 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq54 167 5e-36
seq8 89.7 1e-12
>seq54
Length=3157102
Score = 167 bits (184), Expect = 5e-36
Identities = 188/252 (75%), Gaps = 0/252 (0%)
Strand=Plus/Minus
Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445
|||||| || || |||| | ||| |||||||| | ||||||| |||| ||| ||
Sbjct 1793860 ATCATTGTCGAGGCCGTTGGTATCGAGCAGGAGTTCCTCACTGACGCTCTTCCCTGTGGC 1793801
Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505
|| ||||||||||||| | || ||| | ||||||||||| || || || ||||| |
Sbjct 1793800 CTGCTTGGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTTGTCGCTGACCGTCTC 1793741
Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565
| || || ||||| || |||| ||||||||| |||||||| | || ||||||
Sbjct 1793740 CTCGTGGCCCTTGGCAACAAGAAGTACTACAACTCTGCCAACCCCTTCGACTTCATGGAG 1793681
Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625
||| || || || ||||||||||||||||| ||||||||| |||||||||||| |
Sbjct 1793680 TCCATCTCCCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTATCAGAAG 1793621
Query 230626 CCTGGTGTGATG 230637
||||||| |||
Sbjct 1793620 GCTGGTGTCATG 1793609
>seq8
Length=3887683
Score = 89.7 bits (98), Expect = 1e-12
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 319812 GTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAG 319871
|||||| ||||| || ||||| | || || | ||||| |||||| || || ||
Sbjct 1607319 GTCGAGGTCGTGCTCGACGTAGACGGTCTTGACCTCATCCTTCTTGGGGAAACCCTCGAG 1607378
Query 319872 CTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAG 319931
||| |||| ||||||||||| ||||| | ||||| | ||||| || || ||
Sbjct 1607379 CTGCTCGTTGTTGATAGCGCGCATGAGGGTGGTCTTACCGGAACCGTTGGGGCCCAGGAG 1607438
Query 319932 ACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCACC 319991
|||||| || | || || || ||| | | || | |||||| ||||| || ||||
Sbjct 1607439 ACCGTAACGCTGGCCACGCTTGAGGCGCAGGTGAGTCTGGTTCAGCAGAATCTTGGCACC 1607498
Query 319992 ATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030
|| |||||||| || ||| | || |||||||||||
Sbjct 1607499 GTAAGCCAGAGAGAAGGTACAGTTGCAAAGATCCTCACC 1607537
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057823159691060
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |