Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq54 167 5e-36 seq8 89.7 1e-12 >seq54 Length=3157102 Score = 167 bits (184), Expect = 5e-36 Identities = 188/252 (75%), Gaps = 0/252 (0%) Strand=Plus/Minus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445 |||||| || || |||| | ||| |||||||| | ||||||| |||| ||| || Sbjct 1793860 ATCATTGTCGAGGCCGTTGGTATCGAGCAGGAGTTCCTCACTGACGCTCTTCCCTGTGGC 1793801 Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || ||||||||||||| | || ||| | ||||||||||| || || || ||||| | Sbjct 1793800 CTGCTTGGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTTGTCGCTGACCGTCTC 1793741 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | || || ||||| || |||| ||||||||| |||||||| | || |||||| Sbjct 1793740 CTCGTGGCCCTTGGCAACAAGAAGTACTACAACTCTGCCAACCCCTTCGACTTCATGGAG 1793681 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625 ||| || || || ||||||||||||||||| ||||||||| |||||||||||| | Sbjct 1793680 TCCATCTCCCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTATCAGAAG 1793621 Query 230626 CCTGGTGTGATG 230637 ||||||| ||| Sbjct 1793620 GCTGGTGTCATG 1793609 >seq8 Length=3887683 Score = 89.7 bits (98), Expect = 1e-12 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 319812 GTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAG 319871 |||||| ||||| || ||||| | || || | ||||| |||||| || || || Sbjct 1607319 GTCGAGGTCGTGCTCGACGTAGACGGTCTTGACCTCATCCTTCTTGGGGAAACCCTCGAG 1607378 Query 319872 CTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAG 319931 ||| |||| ||||||||||| ||||| | ||||| | ||||| || || || Sbjct 1607379 CTGCTCGTTGTTGATAGCGCGCATGAGGGTGGTCTTACCGGAACCGTTGGGGCCCAGGAG 1607438 Query 319932 ACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCACC 319991 |||||| || | || || || ||| | | || | |||||| ||||| || |||| Sbjct 1607439 ACCGTAACGCTGGCCACGCTTGAGGCGCAGGTGAGTCTGGTTCAGCAGAATCTTGGCACC 1607498 Query 319992 ATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030 || |||||||| || ||| | || ||||||||||| Sbjct 1607499 GTAAGCCAGAGAGAAGGTACAGTTGCAAAGATCCTCACC 1607537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823159691060