Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03-
04] 62 sequences; 34,340,580 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq54 96.9 4e-15
>seq54
Length=3157102
Score = 96.9 bits (106), Expect = 4e-15
Identities = 195/287 (68%), Gaps = 3/287 (1%)
Strand=Plus/Plus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
||||| ||||| |||||||| ||| | |||||||| ||||||||||| |||||
Sbjct 1794236 ATATAAGTATCAATGAGTAGAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGG 1794295
Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353
|| ||||| ||||| || || || | || || || || || ||| || || | ||
Sbjct 1794296 AAACCGTAGAAGCAACGAGCCTCGGGAATCTGGACCTCTCCGCTGAAACGCTCGACCAGG 1794355
Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413
|||||||| ||||| |||||| || ||||| || || | | || ||||| ||
Sbjct 1794356 TTTTCGTTGACGATACCGTCGGAGGCAGCGAAGAAGGCAAGGACGTGGGAGATGAAGTAA 1794415
Query 17414 TTTTCGTC--CGGTG-TAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCT 17470
|| || || || | | ||||||| | | ||| ||||||| ||| | ||
Sbjct 1794416 CGCTCATCATCGTTGAGGCGGTTGTGCCAGTCGTGGAGATCCTTGGATAGATCAATCTCC 1794475
Query 17471 TCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517
|| | |||||| ||| ||| | ||||| || ||||| | ||| ||
Sbjct 1794476 TCAGCGGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCAGAT 1794522
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545198902160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |