Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq54 93.3 4e-14 >seq54 Length=3157102 Score = 93.3 bits (102), Expect = 4e-14 Identities = 194/287 (68%), Gaps = 3/287 (1%) Strand=Plus/Plus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 ||||| |||||||| |||| | ||| | || ||||| |||||||| || ||||| Sbjct 1794236 ATATAAGTATCAATGAGTAGAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGG 1794295 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591 || || |||||||| |||||||| | || || || || || || || || ||||| Sbjct 1794296 AAACCGTAGAAGCAACGAGCCTCGGGAATCTGGACCTCTCCGCTGAAACGCTCGACCAGG 1794355 Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATAT 16651 || || || ||||||||||| ||||| || || || | | ||| ||||| || Sbjct 1794356 TTTTCGTTGACGATACCGTCGGAGGCAGCGAAGAAGGCAAGGACGTGGGAGATGAAGTAA 1794415 Query 16652 TTTTCGTCA--GATG-TAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCT 16708 || ||| | || | | ||||| || | | ||| ||||||| ||| | || Sbjct 1794416 CGCTCATCATCGTTGAGGCGGTTGTGCCAGTCGTGGAGATCCTTGGATAGATCAATCTCC 1794475 Query 16709 TCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755 || | ||||| || ||| | ||||| || ||||||| ||| || Sbjct 1794476 TCAGCGGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCAGAT 1794522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414003653840