Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03-
04] 62 sequences; 34,340,580 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq10 123 3e-23
seq54 120 4e-22
>seq10
Length=3304607
Score = 123 bits (136), Expect = 3e-23
Identities = 367/564 (65%), Gaps = 8/564 (1%)
Strand=Plus/Plus
Query 53705 GCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 53764
|||| ||| |||| || ||||| || ||||||| || | | || | || ||||||
Sbjct 1364202 GCAAGAGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACTGTACTCGATGATCTCA 1364261
Query 53765 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 53824
||||| || || | || ||||| | || | || || ||||| ||||| ||
Sbjct 1364262 GTGCACAGGTTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAA 1364321
Query 53825 GCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTC 53884
|||||||| || || ||||| || ||||||| ||| |||||| || | ||| || | |
Sbjct 1364322 GCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCATAC 1364381
Query 53885 CAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGT----GT 53940
|||| ||||||| || | || | | ||| ||| || | ||
Sbjct 1364382 CAGAGCTTCTGAGCCTTAATGGTC--TTGCGGCCACGGCCCTCCTTCTCGTACTTCTCGT 1364439
Query 53941 ATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACA 54000
| | | | || ||||| || || | |||| | | |||| || | || ||
Sbjct 1364440 AGAGAGCC--TCGAACTCATCACCGTAGACATCAGCGAGACCAGAGGCCTCGTTGGGGCA 1364497
Query 54001 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 54060
| | | ||| || |||| | ||| || || ||||| || ||||||||| |||| ||
Sbjct 1364498 GAAGAGAGTCCAGTCACCGTTAGCCTCAACACGCTTCATGAACAGATCAGGAGTCCAGAG 1364557
Query 54061 AGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 54120
||| || ||||| | || | | ||| || || || ||||| ||||||||
Sbjct 1364558 AGCGTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACCGTGGTTCTTACGGAGATCGAG 1364617
Query 54121 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTT 54180
|||| | | | ||| | ||||| || |||| ||| |||| | | ||||| || ||
Sbjct 1364618 GAACTCGAAGACATCTGCGTGCCAGGGCTCCAGGTAGATGGCAAACGCACCAGGGCGCTT 1364677
Query 54181 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 54240
||| || ||||| || | ||| | || |||||||| | || | | ||| |||| |||
Sbjct 1364678 GTTACCACCCTGGTCAACGTAGCGGGCAGTGTTATTGAACACACGGAGCATAGGAACAAT 1364737
Query 54241 ACCATTGGATGCACCATTGGTCCC 54264
||||||||| | |||||||| ||
Sbjct 1364738 ACCATTGGAGGAGCCATTGGTTCC 1364761
>seq54
Length=3157102
Score = 120 bits (132), Expect = 4e-22
Identities = 114/146 (78%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 24134 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 24193
||| |||||||| ||| ||||||||||| | | ||| | ||||||||| || |||||
Sbjct 1793912 ACAAGCGAAATCAGTGTGGAGACCCTCGTCACGAGAAATGAGTTCGTTGGAGAAGGTGAG 1793971
Query 24194 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 24253
|||||||| || |||||||| || ||||| || ||||| || || || ||||| |||||
Sbjct 1793972 ACCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAA 1794031
Query 24254 AATTCCTTCTACTGCCGCAAAGGCAA 24279
|| || || || || || |||||||
Sbjct 1794032 GATACCCTCGACAGCAGCGAAGGCAA 1794057
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721139865760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |