Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq54 185 9e-42 seq36 141 1e-28 seq27 132 5e-26 seq26 98.7 1e-15 >seq54 Length=3157102 Score = 185 bits (204), Expect = 9e-42 Identities = 200/259 (77%), Gaps = 7/259 (3%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||||| |||||| | || || Sbjct 1794522 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCTGAGGAGATTGATCTA 1794463 Query 116696 TCCAAGGA-CACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAA 116751 |||||||| | | | ||||||| | ||| | ||||| | ||||| | |||||| Sbjct 1794462 TCCAAGGATCTCCA-CGACTGGCACAACCGCCTCAACGATGATGAGCGTTACTTCATCTC 1794404 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 ||||| || ||||| ||||| ||| |||||| ||||||||||| || ||||||||||| Sbjct 1794403 CCACGTCCTTGCCTTCTTCGCTGCCTCCGACGGTATCGTCAACGAAAACCTGGTCGAGCG 1794344 Query 116812 TTTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCA 116870 |||| || || |||| ||| | ||||||| || ||||||||||| || |||||| | Sbjct 1794343 TTTCAGCGGAG-AGGTCCAGATTCCCGAGGCTCGTTGCTTCTACGGTTTCCAGATCATGA 1794285 Query 116871 TGGAGAACGTGCACTCGGA 116889 |||||||| | ||||| || Sbjct 1794284 TGGAGAACATCCACTCCGA 1794266 Score = 156 bits (172), Expect = 4e-33 Identities = 313/456 (69%), Gaps = 6/456 (1%) Strand=Plus/Minus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||||||||||| | || |||||| | || ||| | |||||| ||| | Sbjct 1794120 AGAAGGCCGAGTGGGCCATCCGTTGGATCAATGACACTGAGTCGACCTTCGCTTCGCGTC 1794061 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 |||| |||||||| || |||||||| ||||||| || || |||||| |||| || | Sbjct 1794060 TGGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGTTCCTTCGCCTCCATCTTCT 1794001 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||||||||| || || || |||||||| || || ||| |||||| ||||| || | | Sbjct 1794000 GGCTCAAGAAGCGTGGTCTGATGCCCGGTCTCACCTTCTCCAACGAACTCATTTCTCGTG 1793941 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACC-G 117220 |||||||||| || || || || ||| | || ||| || || || || || | Sbjct 1793940 ACGAGGGTCTCCACACTGATTTCGCTTGTCTCCTCTTCTCTCACCTGAACCACCGCCCTG 1793881 Query 117221 AGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTC 117280 | | | | ||| || ||| | ||| || || | ||||||||| |||||| Sbjct 1793880 ATC-CCAAGGTCGTTGAAGACATCATTGTCGAGGCCGTTGGTATCGAGCAGGAGTTCCTC 1793822 Query 117281 ACCGAAGCGC-TGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACA 117338 || || || | | || ||| | ||||| || | || || || | |||| || |||| Sbjct 1793821 ACTGACGCTCTTCCCTGTG-GCCTGCTTGGCATGAA-CGCCAAGCTCATGTGCCAGTACA 1793764 Query 117339 TCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGC 117398 ||||||| ||||| ||| | || || | | || | | | ||| |||||||| | Sbjct 1793763 TCGAGTTTGTCGCTGACCGTCTCCTCGTGGCCCTTGGCAACAAGAAGTACTACAACTCTG 1793704 Query 117399 CCAACCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434 ||||||| | ||||| ||| | ||||||| ||| Sbjct 1793703 CCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGG 1793668 >seq36 Length=2049559 Score = 141 bits (156), Expect = 1e-28 Identities = 159/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| |||||||| || ||||| || || |||||||| | || || || | || Sbjct 284197 ATGCAAATCTTCGTAAAGACCCTCACCGGAAAGACCATCACTCTTGAAGTTGAGTCTTCC 284256 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || |||| || || ||||| ||||| | ||||| Sbjct 284257 GACACCATCGACAACG-TCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCTCCCGACCA 284315 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || ||||| || || | ||||| ||| ||||||||| Sbjct 284316 GCAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGATGGTCGCACTCTCTCCGACTACAA 284375 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| |||| || ||||| || Sbjct 284376 CATCCAGAAGGAGTCCACTCTCCATCTCGT 284405 Score = 122 bits (134), Expect = 9e-23 Identities = 151/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || ||||| ||||| |||||||| | || || ||| | | Sbjct 284653 ATGCAAATTTTTGTCAAGACACTCACTGGCAAGACCATCACGCTGGAAGTGGAATCATCT 284712 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| || || | ||||| ||||| |||||| | ||||| Sbjct 284713 GACACGATCGACAACGTT-AAGAGCAAGATCCAGGACAAGGAGGGTATCCCCCCAGACCA 284771 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| || || |||||||| |||| ||||||||| |||||||| Sbjct 284772 GCAGCGTCTTATCTTCGCCGGTAAGCAGCTGGAGGACGGGCGCACCCTTTCTGACTACAA 284831 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| || ||||| Sbjct 284832 TATCCAGAAGGAGAGTACCCTGCA 284855 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| || || |||||||| | || || || | | Sbjct 284425 ATGCAAATTTTCGTGAAGACCCTCACCGGAAAGACCATCACTCTGGAGGTAGAGTCGTCG 284484 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| ||||| ||| || | || || || ||||||||| | ||||| Sbjct 284485 GATACCATCGATAACG-TCAAGTCAAAGATCCAGGATAAGGAAGGCATCCCCCCTGACCA 284543 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| || |||| || || || ||||| || || | |||||||| ||||||||| Sbjct 284544 GCAACGTCTTATCTTTGCCGGTAAGCAGCTTGAGGATGGCCGCACCCTGTCCGACTACAA 284603 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||| ||||| |||| ||||| || || Sbjct 284604 CATCCAAAAGGAATCCACTCTGCACCTTGT 284633 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAA 40773 || ||||| |||||||| | || || || | |||||| | | | | ||||| Sbjct 283993 ACCGGCAAGACCATCACTCTTGAGGTTGAGTCTTCCGACACCATCGACAATGTCAAGTCC 284052 Query 40774 AAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAA 40833 || |||| || || || ||||| || | |||||||| || || || | ||| ||||| Sbjct 284053 AAGATTCAGGATAAGGAAGGCATTCCTCCTGACCAGCAGCGCCTGATTTTCGCAGGCAAG 284112 Query 40834 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893 ||||| || || | || ||||| | |||||||||||| ||||||||| |||| || || Sbjct 284113 CAGCTTGAGGATGGCCGTACCCTGAGCGACTACAACATTCAGAAGGAGTCCACCCTTCAC 284172 Query 40894 CTAGT 40898 || || Sbjct 284173 CTTGT 284177 >seq27 Length=4901019 Score = 132 bits (146), Expect = 5e-26 Identities = 140/182 (77%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || ||||| || ||||| ||| |||||||||| | | ||||| | | Sbjct 3950799 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 3950740 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| ||||| || || | ||||| |||||||| ||| | |||||||| || || Sbjct 3950739 GACAACG-TCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCGCCT 3950681 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| ||||| ||||| || || | |||||||| | |||||||||||||||||| Sbjct 3950680 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 3950621 Query 40878 GG 40879 || Sbjct 3950620 GG 3950619 >seq26 Length=2837646 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| |||||| | |||||||| || || |||| ||| ||||| ||||| || Sbjct 1001109 GACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 1001050 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||| ||||| || ||||||||||||||||||||| | || || || || || | Sbjct 1001049 GACGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTCCTC 1000990 Query 40903 CGCTTGAGGGGCGGCGG 40919 ||| || | || || || Sbjct 1000989 CGCCTGCGTGGTGGTGG 1000973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218800705120