Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03-
04] 62 sequences; 34,340,580 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq54 185 9e-42
seq36 141 1e-28
seq27 132 5e-26
seq26 98.7 1e-15
>seq54
Length=3157102
Score = 185 bits (204), Expect = 9e-42
Identities = 200/259 (77%), Gaps = 7/259 (3%)
Strand=Plus/Minus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||||||||| || |||||||||| |||||| | || ||
Sbjct 1794522 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCTGAGGAGATTGATCTA 1794463
Query 116696 TCCAAGGA-CACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAA 116751
|||||||| | | | ||||||| | ||| | ||||| | ||||| | ||||||
Sbjct 1794462 TCCAAGGATCTCCA-CGACTGGCACAACCGCCTCAACGATGATGAGCGTTACTTCATCTC 1794404
Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811
||||| || ||||| ||||| ||| |||||| ||||||||||| || |||||||||||
Sbjct 1794403 CCACGTCCTTGCCTTCTTCGCTGCCTCCGACGGTATCGTCAACGAAAACCTGGTCGAGCG 1794344
Query 116812 TTTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCA 116870
|||| || || |||| ||| | ||||||| || ||||||||||| || |||||| |
Sbjct 1794343 TTTCAGCGGAG-AGGTCCAGATTCCCGAGGCTCGTTGCTTCTACGGTTTCCAGATCATGA 1794285
Query 116871 TGGAGAACGTGCACTCGGA 116889
|||||||| | ||||| ||
Sbjct 1794284 TGGAGAACATCCACTCCGA 1794266
Score = 156 bits (172), Expect = 4e-33
Identities = 313/456 (69%), Gaps = 6/456 (1%)
Strand=Plus/Minus
Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041
|||||||||||||||| | || |||||| | || ||| | |||||| ||| |
Sbjct 1794120 AGAAGGCCGAGTGGGCCATCCGTTGGATCAATGACACTGAGTCGACCTTCGCTTCGCGTC 1794061
Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101
|||| |||||||| || |||||||| ||||||| || || |||||| |||| || |
Sbjct 1794060 TGGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGTTCCTTCGCCTCCATCTTCT 1794001
Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161
|||||||||| || || || |||||||| || || ||| |||||| ||||| || | |
Sbjct 1794000 GGCTCAAGAAGCGTGGTCTGATGCCCGGTCTCACCTTCTCCAACGAACTCATTTCTCGTG 1793941
Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACC-G 117220
|||||||||| || || || || ||| | || ||| || || || || || |
Sbjct 1793940 ACGAGGGTCTCCACACTGATTTCGCTTGTCTCCTCTTCTCTCACCTGAACCACCGCCCTG 1793881
Query 117221 AGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTC 117280
| | | | ||| || ||| | ||| || || | ||||||||| ||||||
Sbjct 1793880 ATC-CCAAGGTCGTTGAAGACATCATTGTCGAGGCCGTTGGTATCGAGCAGGAGTTCCTC 1793822
Query 117281 ACCGAAGCGC-TGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACA 117338
|| || || | | || ||| | ||||| || | || || || | |||| || ||||
Sbjct 1793821 ACTGACGCTCTTCCCTGTG-GCCTGCTTGGCATGAA-CGCCAAGCTCATGTGCCAGTACA 1793764
Query 117339 TCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGC 117398
||||||| ||||| ||| | || || | | || | | | ||| |||||||| |
Sbjct 1793763 TCGAGTTTGTCGCTGACCGTCTCCTCGTGGCCCTTGGCAACAAGAAGTACTACAACTCTG 1793704
Query 117399 CCAACCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434
||||||| | ||||| ||| | ||||||| |||
Sbjct 1793703 CCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGG 1793668
>seq36
Length=2049559
Score = 141 bits (156), Expect = 1e-28
Identities = 159/210 (76%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| |||||||| || ||||| || || |||||||| | || || || | ||
Sbjct 284197 ATGCAAATCTTCGTAAAGACCCTCACCGGAAAGACCATCACTCTTGAAGTTGAGTCTTCC 284256
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| ||||| || |||| || || ||||| ||||| | |||||
Sbjct 284257 GACACCATCGACAACG-TCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCTCCCGACCA 284315
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || ||||||| ||| || || ||||| || || | ||||| ||| |||||||||
Sbjct 284316 GCAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGATGGTCGCACTCTCTCCGACTACAA 284375
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||||||||||| |||| || ||||| ||
Sbjct 284376 CATCCAGAAGGAGTCCACTCTCCATCTCGT 284405
Score = 122 bits (134), Expect = 9e-23
Identities = 151/204 (74%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || || || ||||| ||||| |||||||| | || || ||| | |
Sbjct 284653 ATGCAAATTTTTGTCAAGACACTCACTGGCAAGACCATCACGCTGGAAGTGGAATCATCT 284712
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| | ||| || || | ||||| ||||| |||||| | |||||
Sbjct 284713 GACACGATCGACAACGTT-AAGAGCAAGATCCAGGACAAGGAGGGTATCCCCCCAGACCA 284771
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || |||| ||| || || |||||||| |||| ||||||||| ||||||||
Sbjct 284772 GCAGCGTCTTATCTTCGCCGGTAAGCAGCTGGAGGACGGGCGCACCCTTTCTGACTACAA 284831
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
|||||||||||| || |||||
Sbjct 284832 TATCCAGAAGGAGAGTACCCTGCA 284855
Score = 120 bits (132), Expect = 3e-22
Identities = 154/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || ||||| || || |||||||| | || || || | |
Sbjct 284425 ATGCAAATTTTCGTGAAGACCCTCACCGGAAAGACCATCACTCTGGAGGTAGAGTCGTCG 284484
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | | |||| ||||| ||| || | || || || ||||||||| | |||||
Sbjct 284485 GATACCATCGATAACG-TCAAGTCAAAGATCCAGGATAAGGAAGGCATCCCCCCTGACCA 284543
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|||||| || |||| || || || ||||| || || | |||||||| |||||||||
Sbjct 284544 GCAACGTCTTATCTTTGCCGGTAAGCAGCTTGAGGATGGCCGCACCCTGTCCGACTACAA 284603
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||| ||||| |||| ||||| || ||
Sbjct 284604 CATCCAAAAGGAATCCACTCTGCACCTTGT 284633
Score = 95.1 bits (104), Expect = 1e-14
Identities = 132/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAA 40773
|| ||||| |||||||| | || || || | |||||| | | | | |||||
Sbjct 283993 ACCGGCAAGACCATCACTCTTGAGGTTGAGTCTTCCGACACCATCGACAATGTCAAGTCC 284052
Query 40774 AAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAA 40833
|| |||| || || || ||||| || | |||||||| || || || | ||| |||||
Sbjct 284053 AAGATTCAGGATAAGGAAGGCATTCCTCCTGACCAGCAGCGCCTGATTTTCGCAGGCAAG 284112
Query 40834 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893
||||| || || | || ||||| | |||||||||||| ||||||||| |||| || ||
Sbjct 284113 CAGCTTGAGGATGGCCGTACCCTGAGCGACTACAACATTCAGAAGGAGTCCACCCTTCAC 284172
Query 40894 CTAGT 40898
|| ||
Sbjct 284173 CTTGT 284177
>seq27
Length=4901019
Score = 132 bits (146), Expect = 5e-26
Identities = 140/182 (77%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || || ||||| || ||||| ||| |||||||||| | | ||||| | |
Sbjct 3950799 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 3950740
Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817
| |||| ||||| || || | ||||| |||||||| ||| | |||||||| || ||
Sbjct 3950739 GACAACG-TCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCGCCT 3950681
Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877
|||| ||| ||||| ||||| || || | |||||||| | ||||||||||||||||||
Sbjct 3950680 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 3950621
Query 40878 GG 40879
||
Sbjct 3950620 GG 3950619
>seq26
Length=2837646
Score = 98.7 bits (108), Expect = 1e-15
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| ||||| |||||| | |||||||| || || |||| ||| ||||| ||||| ||
Sbjct 1001109 GACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 1001050
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|||| ||||| || ||||||||||||||||||||| | || || || || || |
Sbjct 1001049 GACGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTCCTC 1000990
Query 40903 CGCTTGAGGGGCGGCGG 40919
||| || | || || ||
Sbjct 1000989 CGCCTGCGTGGTGGTGG 1000973
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515218800705120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |