Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq36 114 1e-20 seq27 107 2e-18 >seq36 Length=2049559 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| || ||||| || || |||||||| ||| | |||||| |||||| ||||| Sbjct 284399 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCCTCAAGCTGC 284340 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 ||||| ||| |||||||||||||||| |||||||| || |||||||| || ||| || Sbjct 284339 TTTCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTATCCTGAATCTTG 284280 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 || || | |||| |||||| | ||| || || | || | || || ||||| Sbjct 284279 GACTTGACGTTGTCGATGGTGTCGGAAGACTCAACTTCAAGAGTGATGGTCTTTCCGGTG 284220 Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738 || || ||||| || || ||||| Sbjct 284219 AGGGTCTTTACGAAGATTTGCAT 284197 Score = 95.1 bits (104), Expect = 1e-14 Identities = 126/175 (72%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || ||||||||||| ||||||| || || |||||| ||||| || || Sbjct 284165 GTGGACTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGCTGCTTGCCT 284106 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| | || || |||||||| || ||||| ||||| ||||| || ||| || || Sbjct 284105 GCGAAAATCAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGAATCTTGGACTTG 284046 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCA 118716 || | |||| |||||| | ||| ||||| | || | || |||||||||| Sbjct 284045 ACATTGTCGATGGTGTCGGAAGACTCAACCTCAAGAGTGATGGTCTTGCCGGTCA 283991 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | ||| ||| || || || ||||| || | |||||| ||||| Sbjct 284862 CACCAAGTGCAGGGTACTCTCCTTCTGGATATTGTAGTCAGAAAGGGTGCGCCCGTCCTC 284803 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || ||| |||| ||||||||||| || || || || ||||||||||| Sbjct 284802 CAGCTGCTTACCGGCGAAGATAAGACGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTG 284743 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTT 118707 || || ||||| | |||| ||||| | || | || || || | || | || | Sbjct 284742 GATCTTGCTCTTAACGTTGTCGATCGTGTCAGATGAT-TCCACTTCCAGCGTGATGGTCT 284684 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| || || || || |||||||| ||||| Sbjct 284683 TGCCAGTGAGTGTCTTGACAAAAATTTGCAT 284653 >seq27 Length=4901019 Score = 107 bits (118), Expect = 2e-18 Identities = 135/182 (74%), Gaps = 4/182 (2%) Strand=Plus/Plus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || || |||||||| ||||||| ||||| |||||||||||| || || ||| |||| Sbjct 3950621 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 3950680 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAATTTTTTGT-TTAACCTGTT 118668 || |||||||| || || || ||||||||||||| ||| | | || || || || | | Sbjct 3950681 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGA--TCTTGGTCTTGACGTTGT 3950738 Query 118669 CGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728 ||| |||||| | |||||| |||| ||| | || || || ||||| || || || | Sbjct 3950739 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 3950798 Query 118729 AA 118730 || Sbjct 3950799 AA 3950800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830072186904