Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq10 273 2e-68 seq54 131 1e-25 seq36 98.7 9e-16 seq27 86.0 6e-12 >seq10 Length=3304607 Score = 273 bits (302), Expect = 2e-68 Identities = 592/878 (67%), Gaps = 6/878 (1%) Strand=Plus/Plus Query 23102 ATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTAC 23161 || || |||| || |||||||||| || ||||| | ||||||||| |||||| | Sbjct 1364283 ATAGTTCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTACAGCATGAAG 1364342 Query 23162 GGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACA 23221 || | || ||||| ||| | ||| | || || ||| | ||||||| | || Sbjct 1364343 GGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCATACCAGAGCTTCTGAGCCTTAATG 1364402 Query 23222 CGTCGCACGTAC-CTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACC 23280 ||| || | | ||| || | ||||||||| | ||| | || || || || |||| Sbjct 1364403 -GTCTTGCGGCCACGGCCCTCCTTCTCGTACTTCTCGTAGAGAGCCTCGAACTCATCACC 1364461 Query 23281 GTA-ACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCAT 23339 ||| ||| || || || || | | | | || || | |||| |||| || | Sbjct 1364462 GTAGACA-TCAGCGAGACCAGAGGCCTCGTTGGGGCAGAAGAGAGTCCAGTCACCGTTAG 1364520 Query 23340 TTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGC 23399 ||||| || |||| || ||||| || |||| ||||||||||| || || ||||| | Sbjct 1364521 CCTCAACACGCTTCATGAACAGATCAGGAGTCCAGAGAGCGTAGAAGAGATCCCGGGCAC 1364580 Query 23400 GCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCC 23459 | || || || || ||| |||||| | ||| | || || || || || || |||| Sbjct 1364581 GAACTTCTTCCTTACCGTGGTTCTTACGGAGATCGAGGAACTCGAAGACATCTGCGTGCC 1364640 Query 23460 ACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAAC 23519 | ||||| ||||| | ||||||||| || || | ||| || || ||||| || ||||| | Sbjct 1364641 AGGGCTCCAGGTAGATGGCAAACGCACCAGGGCGCTTGTTACCACCCTGGTCAACGTAGC 1364700 Query 23520 GGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGC 23579 |||| ||||| ||| |||| | ||||| || || | ||| ||||| | ||| | Sbjct 1364701 GGGCAGTGTTATTGAACACACGGAGCATAGGAACAATACCATTGGAGGAGCC-ATTGGTT 1364759 Query 23580 CCGCCACACT-CGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCC 23638 || ||| | ||||| | || || | | |||||| | ||||| ||||| || | Sbjct 1364760 CCACCAATGTAGGAACCGGTGGCACGGATGCGGTGAACATTCAAACCAATGCCACCAGCG 1364819 Query 23639 GATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCT 23698 | || || ||||| || || || |||||||||||||| ||||| |||||||| | Sbjct 1364820 GTCTTGGAAATCATAGCACAGGTCTTAAGAGTGTCGTAGATACCCTCAATGCTGTCTGCG 1364879 Query 23699 TTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGT 23758 | |||||| ||| || |||| | || | | ||| || ||||| ||| || Sbjct 1364880 GACATGTCGACCAGGAAGCAAGAAGCAAGCTGGGGCTGGGGAGTGGCGGCGTTGAAGAGA 1364939 Query 23759 GTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCA 23818 || ||| |||||| || ||||| | ||||| | | ||| || || ||||| Sbjct 1364940 GTGGGGGAGGCGTGGGTGAAGTACTTTTGGGACATCAAGTGGTAGGTCTCAATGGCCTTC 1364999 Query 23819 TCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG 23878 || |||||||| ||||| ||||||| || |||||||||| || || || || | |||| Sbjct 1365000 TCGATGTCCTCGCCGTGGATACCGACAGCAACGCGCATCAGCAGGTGCTGGGGACGCTCG 1365059 Query 23879 ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAG 23938 | |||||| || || ||||||||||| | || || || || || || || Sbjct 1365060 GCAACACTGCCGTTGATACGGAGAAGATATGAACGCTCCAGGGTCTTGAAACCGAAGAAG 1365119 Query 23939 TCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976 | ||||| ||||| || |||| || |||||||| || Sbjct 1365120 TTGTAGTTGAAGTCGCGGTCGTAGACAATGGCCGAGTT 1365157 Score = 114 bits (126), Expect = 1e-20 Identities = 417/650 (64%), Gaps = 7/650 (1%) Strand=Plus/Plus Query 22143 TGGTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCG 22202 ||||||| | || |||||||| |||||||||||||||||||| || || || || | Sbjct 1363324 TGGTGCGCAAGTAGTACATGCCGGTCTTCAGACCCATCTTCCAGCCGGCGAAGTGCATGG 1363383 Query 22203 ACGTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGA 22262 | || | || || | ||| | || || | || | ||||| ||| |||| Sbjct 1363384 AGGTGATCTTGCCCATGGTGGGCTCCTTCAGGTGGATGTTCAGGGACTGGGACTGGTCGA 1363443 Query 22263 TAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGG 22322 | | || || || ||||||||||| | | | ||||| || |||||||| |||| Sbjct 1363444 TGTAGGCACCGCGGTCGGCGGCCATCTGCAGGATGTTACGCTGGGAGATTTCCCAGACGG 1363503 Query 22323 TCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTAT 22382 ||||||| || | |||| || || || ||| |||||||||| ||| | Sbjct 1363504 TCTTGTAGAGGGCCTTGATGTCGGCGGGAATGTTGGGGATGTTCTGGACGGAGCCGCCGT 1363563 Query 22383 TGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGA 22442 | ||||| || || || | ||| ||||||||||| | || | || || | Sbjct 1363564 CGGCGATGATACGGTTCTTCATGTTGTCGGACCACAAACCGAGGTCGACAAGGTCCTTCA 1363623 Query 22443 CCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGG 22502 || |||| || || || ||||| |||| || ||| ||||| ||| ||||| | Sbjct 1363624 GGAGCCAGGGGTTGACGACCTGGAACTCACCGGCCAGGACACGGCGGGAGTAGATGTTCG 1363683 Query 22503 ATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCA 22562 | ||| | || ||||| | || ||| || || |||||| ||| || || || |||| Sbjct 1363684 AGGTGTAGGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGACTGGTAGAGGCAGTGGGCA 1363743 Query 22563 TCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCG 22622 | || || | ||| || ||| | | || || | || || ||| || | Sbjct 1363744 TGGGAGCGACCAGCAGACTGTTGCGGACACCAGTCTCGGCGATCTTGGCCTTCAGAGAAG 1363803 Query 22623 ACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC-- 22680 ||||||||| || || | || || | ||||||||| ||||| |||| | ||| Sbjct 1363804 CCCAGTCCCAGAGGTCAGTGGGAGT---ACGGTCCCACATGTCGTACTGCAGGATGCCCT 1363860 Query 22681 GCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCA 22740 |||| || ||| ||| ||| || ||||| | ||| | ||| || ||| | Sbjct 1363861 GCGAGACG--GGGGAGCCGGGGTAGGTCTCGTAGGTACCGAGCTGCTTGGCCAGGTCGGA 1363918 Query 22741 GCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCA 22790 | || || || |||| || |||||||||||||| | |||||| Sbjct 1363919 GGAGGCAGTCAGGGCACCGTGGTAGATAGTCTCGAAGATCTGGATGTTCA 1363968 >seq54 Length=3157102 Score = 131 bits (144), Expect = 1e-25 Identities = 266/389 (68%), Gaps = 16/389 (4%) Strand=Plus/Minus Query 57909 ATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCC 57968 || ||||||||||| |||||| | ||| ||||| || | | | | || ||||| Sbjct 1794127 ATTGCCAAGAAGGCCGAGTGGGCCATCCGTTGGATCAATGACACTGAGTCGACCTTCGCT 1794068 Query 57969 GAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCA 58028 | | || | || ||||| || ||||| ||||| ||||| || || ||| || | Sbjct 1794067 TCGCGTCTGGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGTTCCTTCGCCTCC 1794008 Query 58029 ATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATA 58088 || || ||| | ||||| || || ||||||||||| || || || |||||| | || Sbjct 1794007 ATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGTCTCACCTTCTCCAACGAACTCATT 1793948 Query 58089 TCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAAT 58148 || || |||||||||||||| |||||||| || || || | | ||||||| | Sbjct 1793947 TCTCGTGACGAGGGTCTCCACACTGATTTCGCTTGTCTCCTCTTCTCTCAC-------CT 1793895 Query 58149 AAACCGACG-CGGGATCGCA---TC-TTG--GACATTATCACCGAGGCGGTCGCGATCGA 58201 |||| || | |||| || || ||| ||||| || |||||| || | ||||| Sbjct 1793894 GAACCACCGCCCTGATCCCAAGGTCGTTGAAGACATCATTGTCGAGGCCGTTGGTATCGA 1793835 Query 58202 AAATGAGTTTGTCACCGAAGC-CCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGA 58260 | ||||| |||| || || | | || |||||| |||| || |||||| | | | Sbjct 1793834 GCAGGAGTTCCTCACTGACGCTCTTCCCTGTGGCC-TGCTTGGCATGAACGCCAAGCTCA 1793776 Query 58261 TGTCAAAGTACATTGAGTTTGTTGCCGAC 58289 ||| ||||||| |||||||| || ||| Sbjct 1793775 TGTGCCAGTACATCGAGTTTGTCGCTGAC 1793747 >seq36 Length=2049559 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||||||||| || || || || || ||||| | || ||||| | ||| Sbjct 284197 ATGCAAATCTTCGTAAAGACCCTCACCGGAAAGACCATCACTCTTGAAGTTGAGTCTTCC 284256 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||| ||||| || | || ||||||||| Sbjct 284257 GACACCATCGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCTCCCGACCAG 284316 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||| || || ||| | || || | ||| | ||| || ||| Sbjct 284317 CAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGATGGTCGCACTCTCTCCGACTACAAC 284376 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || || ||||| ||||| || || Sbjct 284377 ATCCAGAAGGAGTCCACTCTCCATCTCGTCCT 284408 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| ||||| || || || || || ||||| | || || || |||| Sbjct 284425 ATGCAAATTTTCGTGAAGACCCTCACCGGAAAGACCATCACTCTGGAGGTAGAGTCGTCG 284484 Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | |||| | ||||| || || || ||| ||||||||| | || || ||||| Sbjct 284485 GATACCATCGATAACGTCAAGTCAAAG-ATCCAGGATAAGGAAGGCATCCCCCCTGACCA 284543 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| ||||| || || || || || ||| | || || || || ||| || || Sbjct 284544 GCAACGTCTTATCTTTGCCGGTAAGCAGCTTGAGGATGGCCGCACCCTGTCCGACTACAA 284603 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| ||||| ||||| ||||| || || || || Sbjct 284604 CATCCAAAAGGAATCCACTCTGCACCTTGTCCT 284636 Score = 87.8 bits (96), Expect = 2e-12 Identities = 115/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || ||||| || || ||||| || ||||| | || || ||| | || Sbjct 284653 ATGCAAATTTTTGTCAAGACACTCACTGGCAAGACCATCACGCTGGAAGTGGAATCATCT 284712 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| |||| | | | ||| | ||||||||| || | || || ||||| Sbjct 284713 GACACGATCGACAACGTTAAGAGCAAGA-TCCAGGACAAGGAGGGTATCCCCCCAGACCA 284771 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 ||||||||| || ||||| || || ||| |||| ||| Sbjct 284772 GCAGCGTCTTATCTTCGCCGGTAAGCAGCTGGAGGAC 284808 Score = 86.0 bits (94), Expect = 6e-12 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 31215 TGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAAC 31274 |||| ||||| || ||||| | || ||||| | ||||||| |||| | ||||| Sbjct 283991 TGACCGGCAAGACCATCACTCTTGAGGTTGAGTCTTCCGACACCATCGACAATGTCAAGT 284050 Query 31275 AGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCA 31334 | || ||| ||||||||| | || || ||||||||||| || || ||||| |||| Sbjct 284051 CCAAGATTCAGGATAAGGAAGGCATTCCTCCTGACCAGCAGCGCCTGATTTTCGCAGGCA 284110 Query 31335 AACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTC 31394 | ||| | || || || ||||||| || |||||||| || || || || |||| Sbjct 284111 AGCAGCTTGAGGATGGCCGTACCCTGAGCGACTACAACATTCAGAAGGAGTCCACCCTTC 284170 Query 31395 ATCTGGTACT 31404 | || || || Sbjct 284171 ACCTTGTCCT 284180 >seq27 Length=4901019 Score = 86.0 bits (94), Expect = 6e-12 Identities = 129/181 (71%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 |||||| ||||| ||||| || || || || ||| ||||||| || || ||||| | Sbjct 3950800 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCAT 3950741 Query 31261 CGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTC 31319 ||| | ||||| || ||| | ||||||||| ||| | || || ||||||||||| | Sbjct 3950740 CGACAACGTCAAGACCAAGA-TCCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCGCC 3950682 Query 31320 TAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAA 31379 | || ||||| ||||| ||| | || || || ||||||| || ||||| || | Sbjct 3950681 TGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGA 3950622 Query 31380 A 31380 | Sbjct 3950621 A 3950621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766054531040