Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03-
04] 62 sequences; 34,340,580 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq10 138 1e-27
seq54 123 3e-23
>seq10
Length=3304607
Score = 138 bits (152), Expect = 1e-27
Identities = 726/1148 (63%), Gaps = 16/1148 (1%)
Strand=Plus/Plus
Query 62943 GCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 63002
|||| ||| |||| || || || || ||||||| || | | || | || ||||||
Sbjct 1364202 GCAAGAGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACTGTACTCGATGATCTCA 1364261
Query 63003 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63062
||||| || || | |||||||| | || | || || ||||| ||||| ||
Sbjct 1364262 GTGCACAGGTTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAA 1364321
Query 63063 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63122
|||||||| || || ||||| || ||||||| ||| |||| | || | ||| || | |
Sbjct 1364322 GCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCATAC 1364381
Query 63123 CAGACGACTC-GAGCCTTTATTATA-----GATTTGTATCTCCTTTCTCTTTCGTATAGA 63176
|||| | || ||||||| || | | | |||||| ||| | | | | |
Sbjct 1364382 CAGA-GCTTCTGAGCCTTAATGGTCTTGCGGCCACGGCCCTCCTT-CTCGTACTTCTCG- 1364438
Query 63177 GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGA 63236
|| | | | |||||||| || || | |||| | | | || || | ||
Sbjct 1364439 -TAGAGAGCC--TCGAACTCATCACCGTAGACATCAGCGAGACCAGAGGCCTCGTTGGGG 1364495
Query 63237 CACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAA 63296
|| | | | ||| || |||| | ||| || || ||||| || ||||||||| ||||
Sbjct 1364496 CAGAAGAGAGTCCAGTCACCGTTAGCCTCAACACGCTTCATGAACAGATCAGGAGTCCAG 1364555
Query 63297 AGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCG 63356
||||| || ||||| | | | | ||| || || || ||||| ||||||
Sbjct 1364556 AGAGCGTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACCGTGGTTCTTACGGAGATCG 1364615
Query 63357 AGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGT 63416
|||||| | | | ||| | ||||| || |||| ||| ||||| | | ||||| ||
Sbjct 1364616 AGGAACTCGAAGACATCTGCGTGCCAGGGCTCCAGGTAGATGGCAAACGCACCAGGGCGC 1364675
Query 63417 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 63476
||||| || ||||| || | ||| | || |||||||| | || | | ||| |||| |
Sbjct 1364676 TTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTATTGAACACACGGAGCATAGGAACA 1364735
Query 63477 ATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTA 63536
||||| || || |||||||| || || ||| || ||||||| || |
Sbjct 1364736 ATACCATTGGAGGAGCCATTGGTTCCACCAATGTAGGAACCGGTGGCACGGATGCGGTGA 1364795
Query 63537 ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTGTC 63595
| | ||| || || || || | || || || | || || || |||| |||||
Sbjct 1364796 ACATTCAAACCAATGCCACCAGCGGTCTTGGAAATCATAGCACA-GGTCTTAAGAGTGTC 1364854
Query 63596 ATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 63655
||||| || || ||||| || || ||||| | || || || || | ||| |
Sbjct 1364855 GTAGATACCCTCAATGCTGTCTGCGGACATGTCGACCAGGAAGCAAGAAGCAAGCTGGGG 1364914
Query 63656 ACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAG 63715
| | ||| | || || || | || || || ||||| || || | |||| || |
Sbjct 1364915 CTGGGGAGTGGCGGCGTTGAAGAGAGTGGGGGAGGCGTGGGTGAAGTACTTTTGGGACAT 1364974
Query 63716 TAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACG 63775
| | ||| |||||||| || || || ||| || || || || || || ||
Sbjct 1364975 CAAGTGGTAGGTCTCAATGGCCTTCTCGATGTCCTCGCCGTGGATACCGACAGCAACGCG 1365034
Query 63776 CATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTT 63835
||| | || |||||| || | || ||| || ||| || | | || ||
Sbjct 1365035 CATCAGCAGGTGCTGGGGACGCTCGGCAACACTGCCGTTGATACGGAGAAGATATGAACG 1365094
Query 63836 TTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGA 63895
|||| || || ||||| || ||||||| ||||| || ||||| | ||| ||||
Sbjct 1365095 CTCCAGGGTCTTGAAACCGAAGAAGTTGTAGTTGAAGTCGCGGTCGTAGACAATGGCCGA 1365154
Query 63896 ATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAATACT-TGAAATAATCGGAG 63954
|| |||| ||| | ||| |||| || | ||| || | | || || || ||||
Sbjct 1365155 GTTAAGCTCATCGGCGTGTTTCATAACAATCT-CATAGTGCTGTTGAGAGATCATAGGAG 1365213
Query 63955 AATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATA 64014
| | || ||||| || |||||||||| | | | || || || |||
Sbjct 1365214 CAGGCTTATTGTTTTTGGGGTTAACATAGTGGTAGAGGTCAGAGATGACCATGGAGAATT 1365273
Query 64015 GtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAAT 64074
| |||||||| | |||||| || || || | ||| || | ||| || || ||||| || |
Sbjct 1365274 GCTTTTTTGTCTGCTTGTGGAGGTTGGAAACGGCAATACGGGCAGCCAGGATGGCGTAGT 1365333
Query 64075 CCGGATGT 64082
|||| |||
Sbjct 1365334 CCGGGTGT 1365341
>seq54
Length=3157102
Score = 123 bits (136), Expect = 3e-23
Identities = 115/146 (79%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 33581 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAG 33640
||| |||||||| ||| ||||||||||| | | ||| | |||||| || || |||||
Sbjct 1793912 ACAAGCGAAATCAGTGTGGAGACCCTCGTCACGAGAAATGAGTTCGTTGGAGAAGGTGAG 1793971
Query 33641 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAA 33700
|||||||| || |||||||| || ||||| || ||||| ||||| || || || |||||
Sbjct 1793972 ACCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAA 1794031
Query 33701 GATTCCTTCTACTGCAGCAAAGGCAA 33726
||| || || || ||||| |||||||
Sbjct 1794032 GATACCCTCGACAGCAGCGAAGGCAA 1794057
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817111891360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |