Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq10 138 1e-27 seq54 123 3e-23 >seq10 Length=3304607 Score = 138 bits (152), Expect = 1e-27 Identities = 726/1148 (63%), Gaps = 16/1148 (1%) Strand=Plus/Plus Query 62943 GCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 63002 |||| ||| |||| || || || || ||||||| || | | || | || |||||| Sbjct 1364202 GCAAGAGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACTGTACTCGATGATCTCA 1364261 Query 63003 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63062 ||||| || || | |||||||| | || | || || ||||| ||||| || Sbjct 1364262 GTGCACAGGTTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAA 1364321 Query 63063 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63122 |||||||| || || ||||| || ||||||| ||| |||| | || | ||| || | | Sbjct 1364322 GCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCATAC 1364381 Query 63123 CAGACGACTC-GAGCCTTTATTATA-----GATTTGTATCTCCTTTCTCTTTCGTATAGA 63176 |||| | || ||||||| || | | | |||||| ||| | | | | | Sbjct 1364382 CAGA-GCTTCTGAGCCTTAATGGTCTTGCGGCCACGGCCCTCCTT-CTCGTACTTCTCG- 1364438 Query 63177 GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGA 63236 || | | | |||||||| || || | |||| | | | || || | || Sbjct 1364439 -TAGAGAGCC--TCGAACTCATCACCGTAGACATCAGCGAGACCAGAGGCCTCGTTGGGG 1364495 Query 63237 CACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAA 63296 || | | | ||| || |||| | ||| || || ||||| || ||||||||| |||| Sbjct 1364496 CAGAAGAGAGTCCAGTCACCGTTAGCCTCAACACGCTTCATGAACAGATCAGGAGTCCAG 1364555 Query 63297 AGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCG 63356 ||||| || ||||| | | | | ||| || || || ||||| |||||| Sbjct 1364556 AGAGCGTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACCGTGGTTCTTACGGAGATCG 1364615 Query 63357 AGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGT 63416 |||||| | | | ||| | ||||| || |||| ||| ||||| | | ||||| || Sbjct 1364616 AGGAACTCGAAGACATCTGCGTGCCAGGGCTCCAGGTAGATGGCAAACGCACCAGGGCGC 1364675 Query 63417 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 63476 ||||| || ||||| || | ||| | || |||||||| | || | | ||| |||| | Sbjct 1364676 TTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTATTGAACACACGGAGCATAGGAACA 1364735 Query 63477 ATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTA 63536 ||||| || || |||||||| || || ||| || ||||||| || | Sbjct 1364736 ATACCATTGGAGGAGCCATTGGTTCCACCAATGTAGGAACCGGTGGCACGGATGCGGTGA 1364795 Query 63537 ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTGTC 63595 | | ||| || || || || | || || || | || || || |||| ||||| Sbjct 1364796 ACATTCAAACCAATGCCACCAGCGGTCTTGGAAATCATAGCACA-GGTCTTAAGAGTGTC 1364854 Query 63596 ATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 63655 ||||| || || ||||| || || ||||| | || || || || | ||| | Sbjct 1364855 GTAGATACCCTCAATGCTGTCTGCGGACATGTCGACCAGGAAGCAAGAAGCAAGCTGGGG 1364914 Query 63656 ACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAG 63715 | | ||| | || || || | || || || ||||| || || | |||| || | Sbjct 1364915 CTGGGGAGTGGCGGCGTTGAAGAGAGTGGGGGAGGCGTGGGTGAAGTACTTTTGGGACAT 1364974 Query 63716 TAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACG 63775 | | ||| |||||||| || || || ||| || || || || || || || Sbjct 1364975 CAAGTGGTAGGTCTCAATGGCCTTCTCGATGTCCTCGCCGTGGATACCGACAGCAACGCG 1365034 Query 63776 CATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTT 63835 ||| | || |||||| || | || ||| || ||| || | | || || Sbjct 1365035 CATCAGCAGGTGCTGGGGACGCTCGGCAACACTGCCGTTGATACGGAGAAGATATGAACG 1365094 Query 63836 TTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGA 63895 |||| || || ||||| || ||||||| ||||| || ||||| | ||| |||| Sbjct 1365095 CTCCAGGGTCTTGAAACCGAAGAAGTTGTAGTTGAAGTCGCGGTCGTAGACAATGGCCGA 1365154 Query 63896 ATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAATACT-TGAAATAATCGGAG 63954 || |||| ||| | ||| |||| || | ||| || | | || || || |||| Sbjct 1365155 GTTAAGCTCATCGGCGTGTTTCATAACAATCT-CATAGTGCTGTTGAGAGATCATAGGAG 1365213 Query 63955 AATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATA 64014 | | || ||||| || |||||||||| | | | || || || ||| Sbjct 1365214 CAGGCTTATTGTTTTTGGGGTTAACATAGTGGTAGAGGTCAGAGATGACCATGGAGAATT 1365273 Query 64015 GtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAAT 64074 | |||||||| | |||||| || || || | ||| || | ||| || || ||||| || | Sbjct 1365274 GCTTTTTTGTCTGCTTGTGGAGGTTGGAAACGGCAATACGGGCAGCCAGGATGGCGTAGT 1365333 Query 64075 CCGGATGT 64082 |||| ||| Sbjct 1365334 CCGGGTGT 1365341 >seq54 Length=3157102 Score = 123 bits (136), Expect = 3e-23 Identities = 115/146 (79%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 33581 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAG 33640 ||| |||||||| ||| ||||||||||| | | ||| | |||||| || || ||||| Sbjct 1793912 ACAAGCGAAATCAGTGTGGAGACCCTCGTCACGAGAAATGAGTTCGTTGGAGAAGGTGAG 1793971 Query 33641 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAA 33700 |||||||| || |||||||| || ||||| || ||||| ||||| || || || ||||| Sbjct 1793972 ACCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAA 1794031 Query 33701 GATTCCTTCTACTGCAGCAAAGGCAA 33726 ||| || || || ||||| ||||||| Sbjct 1794032 GATACCCTCGACAGCAGCGAAGGCAA 1794057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817111891360