Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq54 154 2e-32 seq10 118 2e-21 >seq54 Length=3157102 Score = 154 bits (170), Expect = 2e-32 Identities = 335/496 (68%), Gaps = 23/496 (5%) Strand=Plus/Minus Query 125367 AAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGA 125426 || ||||| | |||| || || |||||| ||||| |||| | | ||| | Sbjct 1794121 AAGAAGGCCGAGTGGGCCATCCGTTGGATCAATGACACTGAGTCGACCTTCGCTTCGCGT 1794062 Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 ||||| || ||||| || || ||||| |||||||| || ||| || || ||||||| Sbjct 1794061 CTGGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGTTCCTTCGCCTCCATCTTC 1794002 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 |||||||||||||| || || |||||||| || || | ||||| | || ||||| Sbjct 1794001 TGGCTCAAGAAGCGTGGTCTGATGCCCGGTCTCACCTTCTCCAACGAACTCATTTCTCGT 1793942 Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT--ATCTGCGTCCC 125603 |||||||| || ||| ||| || || ||| || || || || || | | || || Sbjct 1793941 GACGAGGGTCTCCACACTGATTTCGCTTGTCTCCTCTTCTCTCACCTGAACCACCGCCCT 1793882 Query 125604 GAGTGC-AGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGA 125662 || | || | || |||| | || |||||| ||| ||||| | || || Sbjct 1793881 GATCCCAAGGT----CGTTGAAGA------CATCATTGT---CGAGGCCGTTGGTATCGA 1793835 Query 125663 ACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAAT 125722 || ||||| || || || | || || || || ||||||||||| |||||| || Sbjct 1793834 GCAGGAGTTCCTCACTGACGCTCTTCCCTGTGGCCTGCTTGGCATGAACGCCAAGCTCAT 1793775 Query 125723 GTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA- 125781 |||| ||||||| |||||||| || || ||||| || || | ||||| ||||| Sbjct 1793774 GTGCCAGTACATCGAGTTTGTCGCTGACCGTCTCCT---CGTGGCCCTTGGCAACAAGAA 1793718 Query 125782 --TTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGAC 125839 |||||| | || ||||| || |||||| ||| || || | || ||||| Sbjct 1793717 GTACTACAACTCTGCCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGAC 1793658 Query 125840 CAACTTTTTCGAGAAG 125855 |||||| ||||||||| Sbjct 1793657 CAACTTCTTCGAGAAG 1793642 Score = 136 bits (150), Expect = 6e-27 Identities = 199/279 (71%), Gaps = 2/279 (1%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| ||||||| || ||||| | || ||| | ||||| Sbjct 1794522 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCTGAGGAGATTGATCTA 1794463 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||| || |||| ||| | | || | | || |||||| | || || || Sbjct 1794462 TCCAAGGATCTCCACGACTGGCACAACCGCCTCAACGATGATGAGCGTTACTTCATCTCC 1794403 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198 ||| | | |||||||| || | |||||| || ||||||||||| || ||| | || Sbjct 1794402 CACGTCCTTGCCTTCTTCGCTGCCTCCGACGGTATCGTCAACGAAAACCTGGTCGAGCGT 1794343 Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGAT 125257 ||| |||| | ||||| |||| ||| ||||| ||||| ||||| |||||||| Sbjct 1794342 TTCAGCGGAGAGGTCCAGATTCCCGAGG-CTCGTTGCTTCTACGGTTTCCAGATCATGAT 1794284 Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGA 125296 |||||| | ||||| || | |||||| ||| ||||| Sbjct 1794283 GGAGAACATCCACTCCGAGACCTACTCTCTACTCATTGA 1794245 >seq10 Length=3304607 Score = 118 bits (130), Expect = 2e-21 Identities = 362/548 (66%), Gaps = 14/548 (3%) Strand=Plus/Minus Query 96806 AACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCAC 96864 ||| || ||| | ||| ||| | || || |||||| | ||| |||| || || | | Sbjct 1364759 AACCAATGGCTCCTCCAATGGTATTGTTCCTATGCTCCGTGTGTTCAATAACACTGCC-C 1364701 Query 96865 GATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTT 96924 | |||||| ||||| || || || || || || || | ||| ||||| |||| || | Sbjct 1364700 GCTACGTTGACCAGGGTGGTAACAAGCGCCCTGGTGCGTTTGCCATCTACCTGGAGCCCT 1364641 Query 96925 GGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCAC 96984 ||||||| || || || || || |||| | || || ||| || ||||| | | Sbjct 1364640 GGCACGCAGATGTCTTCGAGTTCCTCGATCTCCGTAAGAACCACGGTAAGGAAGAAGTTC 1364581 Query 96985 GAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACG 97044 | ||| |||| | || || || |||||| || ||| ||||||||||||| || | | Sbjct 1364580 GTGCCCGGGATCTCTTCTACGCTCTCTGGACTCCTGATCTGTTCATGAAGCGTGTTGAGG 1364521 Query 97045 ---ACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCT 97101 |||||| |||||| || | |||||| || | | | ||||| | ||| || Sbjct 1364520 CTAACGGTG---ACTGGACTCTCTTCTGCCCCAACGAGGCCTCTGGTCTCGCTGATGTCT 1364464 Query 97102 GGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGA 97160 || || ||||| ||||| ||| | |||||| | |||||||| || ||| Sbjct 1364463 ACGGTGATGAGTTCGAGGCTCTCTACGAGAAGTACGAGAAGGAGGGCCGTGGCCGCAAGA 1364404 Query 97161 CGAGTCGATGCACGAGAA-CTGTGGAAGGCCA-TCGTGACGGCTCAGGTAGAGACTGGAA 97218 | | | | || | |||| || ||| | |||| || ||| ||| ||| |||||||| | Sbjct 1364403 CCA-TTAAGGCTC-AGAAGCTCTGGTATGCCATTCTTGA-GGCCCAGACTGAGACTGGTA 1364347 Query 97219 CTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCA 97278 || | ||| || ||||||||| | || || |||||||| || |||| | Sbjct 1364346 ACCCCTTCATGCTGTACAAGGATGCTTGCAACAAGAAGAGCAACCAGAAGAACCTGGGAA 1364287 Query 97279 CCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGG 97338 | || ||||||| |||||||| || || | |||||| |||| || ||| | Sbjct 1364286 CTATTCGCAGCTCCAACCTGTGCACTGAGATCATCGAGTACAGTGCTCCTGATGAGGTCG 1364227 Query 97339 CAGTTTGC 97346 | |||||| Sbjct 1364226 CTGTTTGC 1364219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058625679120