Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03-
04] 62 sequences; 34,340,580 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq8 165 1e-36
seq35 161 2e-35
>seq8
Length=3887683
Score = 165 bits (182), Expect = 1e-36
Identities = 187/248 (75%), Gaps = 2/248 (1%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| ||||| | || || ||||| || || ||||||||||| ||||
Sbjct 565637 CGCCAAGCGTCACCGCAAGATCT-TGCGTGACAACATTCAGGGTATCACCAAGCCCGCTA 565579
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
| || ||||| ||||| |||||||| ||||||||| |||| | || |||| || ||||
Sbjct 565578 TTCGCCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGA 565519
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|||| ||| | |||| ||||||| || || |||| ||| || || ||| || |
Sbjct 565518 CCCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCCGTCACCTACACTG 565459
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || || ||||| ||||| || | || ||||||| || | || || || |
Sbjct 565458 AGCACGCCAAGCGCAAGACCGTCACGTCTCTTGACGTCGTCTACGCTCTCAAGCGCCAGG 565399
Query 16671 GCCGTAAG 16678
||||||||
Sbjct 565398 GCCGTAAG 565391
>seq35
Length=1646803
Score = 161 bits (178), Expect = 2e-35
Identities = 198/268 (74%), Gaps = 2/268 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||| || |||| ||| ||| || || |||||||| || || |||||||| || ||
Sbjct 352131 GCCAAGCGCCACCGCAAGAT-TCTACGCGACAACATCCAGGGTATTACCAAGCCCGCCAT 352073
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||| || || ||||| || ||||||||| |||| | || |||| || ||||
Sbjct 352072 CCGCCGTCTCGCCCGCCGTGGCGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGAC 352013
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| | |||| |||||| || | || || | ||| ||| || ||| |||||
Sbjct 352012 CCGCGGTGTCCTCAAGACTTTCCTCGAGTCTGTCATTCGTGACGCTGTCACCTACACCGA 351953
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||||||| |||||||| || ||||| | ||| | ||||| || | || || || ||
Sbjct 351952 GCACGCTAAGCGTAAGACCGTTACCTCGCTTGATGTTGTCTACGCTCTCAAGCGCCAGGG 351893
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||||| | || ||||| || |||||
Sbjct 351892 CCGTACCCTCTACGGTTTCGGTGGTTAA 351865
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075143312966
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |