Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq8 165 1e-36 seq35 161 2e-35 >seq8 Length=3887683 Score = 165 bits (182), Expect = 1e-36 Identities = 187/248 (75%), Gaps = 2/248 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||||| | || || ||||| || || ||||||||||| |||| Sbjct 565637 CGCCAAGCGTCACCGCAAGATCT-TGCGTGACAACATTCAGGGTATCACCAAGCCCGCTA 565579 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 | || ||||| ||||| |||||||| ||||||||| |||| | || |||| || |||| Sbjct 565578 TTCGCCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGA 565519 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 |||| ||| | |||| ||||||| || || |||| ||| || || ||| || | Sbjct 565518 CCCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCCGTCACCTACACTG 565459 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| ||||| || | || ||||||| || | || || || | Sbjct 565458 AGCACGCCAAGCGCAAGACCGTCACGTCTCTTGACGTCGTCTACGCTCTCAAGCGCCAGG 565399 Query 16671 GCCGTAAG 16678 |||||||| Sbjct 565398 GCCGTAAG 565391 >seq35 Length=1646803 Score = 161 bits (178), Expect = 2e-35 Identities = 198/268 (74%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| ||| ||| || || |||||||| || || |||||||| || || Sbjct 352131 GCCAAGCGCCACCGCAAGAT-TCTACGCGACAACATCCAGGGTATTACCAAGCCCGCCAT 352073 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| || || ||||| || ||||||||| |||| | || |||| || |||| Sbjct 352072 CCGCCGTCTCGCCCGCCGTGGCGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGAC 352013 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||| | |||| |||||| || | || || | ||| ||| || ||| ||||| Sbjct 352012 CCGCGGTGTCCTCAAGACTTTCCTCGAGTCTGTCATTCGTGACGCTGTCACCTACACCGA 351953 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||||||| |||||||| || ||||| | ||| | ||||| || | || || || || Sbjct 351952 GCACGCTAAGCGTAAGACCGTTACCTCGCTTGATGTTGTCTACGCTCTCAAGCGCCAGGG 351893 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||||| | || ||||| || ||||| Sbjct 351892 CCGTACCCTCTACGGTTTCGGTGGTTAA 351865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075143312966