Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq10 161 1e-34 seq54 138 1e-27 >seq10 Length=3304607 Score = 161 bits (178), Expect = 1e-34 Identities = 732/1149 (64%), Gaps = 16/1149 (1%) Strand=Plus/Plus Query 62891 GGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTC 62950 ||||| ||| |||| || ||||| || ||||||| || | | || | || ||||| Sbjct 1364201 GGCAAGAGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACTGTACTCGATGATCTC 1364260 Query 62951 AGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACA 63010 |||||| || || | |||||||| | || | || || ||||| ||||| || Sbjct 1364261 AGTGCACAGGTTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCA 1364320 Query 63011 CGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTT 63070 |||||||| || || ||||| || ||||||| ||| |||| | || | ||| || | Sbjct 1364321 AGCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCATA 1364380 Query 63071 CCAGACGACTC-GAGCCTTTATTATA-----GATTTGTATCTCCTTTCTCTTTCGTATAG 63124 ||||| | || ||||||| || | | | |||||| ||| | | | | | Sbjct 1364381 CCAGA-GCTTCTGAGCCTTAATGGTCTTGCGGCCACGGCCCTCCTT-CTCGTACTTCTCG 1364438 Query 63125 TGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGG 63184 | | | | | |||||||| || || | |||| | | |||| || | || Sbjct 1364439 T--AGAGAGCC--TCGAACTCATCACCGTAGACATCAGCGAGACCAGAGGCCTCGTTGGG 1364494 Query 63185 ACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCA 63244 || | | | ||| || |||| | ||| || || ||||| || ||||||||| |||| Sbjct 1364495 GCAGAAGAGAGTCCAGTCACCGTTAGCCTCAACACGCTTCATGAACAGATCAGGAGTCCA 1364554 Query 63245 AAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATC 63304 ||||| || ||||| | || | | ||| || || || ||||| ||||| Sbjct 1364555 GAGAGCGTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACCGTGGTTCTTACGGAGATC 1364614 Query 63305 GAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63364 ||||||| | | | ||| | ||||| || |||| ||| ||||| | | ||||| || Sbjct 1364615 GAGGAACTCGAAGACATCTGCGTGCCAGGGCTCCAGGTAGATGGCAAACGCACCAGGGCG 1364674 Query 63365 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 63424 ||||| || ||||| || | ||| | || |||||||| | || | | ||| |||| Sbjct 1364675 CTTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTATTGAACACACGGAGCATAGGAAC 1364734 Query 63425 AATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACT 63484 |||||| || || |||||||| || || ||| || ||||||| || Sbjct 1364735 AATACCATTGGAGGAGCCATTGGTTCCACCAATGTAGGAACCGGTGGCACGGATGCGGTG 1364794 Query 63485 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTGT 63543 || | ||| || || || || | || || || | || || || |||| |||| Sbjct 1364795 AACATTCAAACCAATGCCACCAGCGGTCTTGGAAATCATAGCACA-GGTCTTAAGAGTGT 1364853 Query 63544 CATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGT 63603 | ||||||||||| ||||| || || ||||| | || || || || | ||| Sbjct 1364854 CGTAGATACCCTCAATGCTGTCTGCGGACATGTCGACCAGGAAGCAAGAAGCAAGCTGGG 1364913 Query 63604 GACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAA 63663 | | ||| | || || || | || || || ||||| || || | |||| || | Sbjct 1364914 GCTGGGGAGTGGCGGCGTTGAAGAGAGTGGGGGAGGCGTGGGTGAAGTACTTTTGGGACA 1364973 Query 63664 GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACAC 63723 | | ||| |||||||| || || || ||| || || || || || || | Sbjct 1364974 TCAAGTGGTAGGTCTCAATGGCCTTCTCGATGTCCTCGCCGTGGATACCGACAGCAACGC 1365033 Query 63724 GCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATT 63783 |||| | || |||||| || | || | | || ||| || | | || || Sbjct 1365034 GCATCAGCAGGTGCTGGGGACGCTCGGCAACACTGCCGTTGATACGGAGAAGATATGAAC 1365093 Query 63784 TTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCG 63843 |||| || || ||||| || ||||||| ||||| || ||||| | ||| ||| Sbjct 1365094 GCTCCAGGGTCTTGAAACCGAAGAAGTTGTAGTTGAAGTCGCGGTCGTAGACAATGGCCG 1365153 Query 63844 AGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACT-TGAAATAATCGGA 63902 |||| || | ||| | ||| |||| || | ||| ||| | | || || || ||| Sbjct 1365154 AGTTAAGCTCATCGGCGTGTTTCATAACAATCT-CATAGTGCTGTTGAGAGATCATAGGA 1365212 Query 63903 GAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAAT 63962 | | | || ||||| || |||||||||| | | | || || || ||| Sbjct 1365213 GCAGGCTTATTGTTTTTGGGGTTAACATAGTGGTAGAGGTCAGAGATGACCATGGAGAAT 1365272 Query 63963 AGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAA 64022 | |||||||| | |||||| || || || ||||| || | ||| || || ||||| || Sbjct 1365273 TGCTTTTTTGTCTGCTTGTGGAGGTTGGAAACGGCAATACGGGCAGCCAGGATGGCGTAG 1365332 Query 64023 TCCGGATGT 64031 ||||| ||| Sbjct 1365333 TCCGGGTGT 1365341 >seq54 Length=3157102 Score = 138 bits (152), Expect = 1e-27 Identities = 118/146 (81%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 33303 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 33362 ||| |||||||| ||| ||||||||||| | | ||| ||||||||||| || ||||| Sbjct 1793912 ACAAGCGAAATCAGTGTGGAGACCCTCGTCACGAGAAATGAGTTCGTTGGAGAAGGTGAG 1793971 Query 33363 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAA 33422 |||||||| || |||||||| || ||||| || ||||| ||||| || ||||| ||||| Sbjct 1793972 ACCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAA 1794031 Query 33423 GATTCCTTCTACTGCAGCAAAGGCAA 33448 ||| || || || ||||| ||||||| Sbjct 1794032 GATACCCTCGACAGCAGCGAAGGCAA 1794057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946717215920