Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq54 154 1e-32 seq27 122 8e-23 seq36 104 2e-17 seq10 96.9 3e-15 seq26 95.1 1e-14 >seq54 Length=3157102 Score = 154 bits (170), Expect = 1e-32 Identities = 340/504 (67%), Gaps = 7/504 (1%) Strand=Plus/Minus Query 46098 CAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCG 46157 |||||| |||| ||||| || |||||||| || |||| ||||| ||| Sbjct 1794122 CAAGAAGGCCGAGTGGGCCATCCGTTGGATCAATGACACTGAGTCGACCTTCGCTTCGCG 1794063 Query 46158 TATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTT 46217 | |||| ||||| || ||| ||||| |||| || ||||| || ||| ||||||| Sbjct 1794062 TCTGGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGTTCCTTCGCCTCCATCTT 1794003 Query 46218 TTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGC 46276 | |||| || | || | | |||||||| || || || |||||| || || || | Sbjct 1794002 CTGGCTCAAGAAGCGTGGTC-TGATGCCCGGTCTCACCTTCTCCAACGAACTCATTTCTC 1793944 Query 46277 GCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACA 46336 | |||||||| || || || || || || |||||| || | ||| | || || || Sbjct 1793943 GTGACGAGGGTCTCCACACTGATTTCGCTTGTCTCCTCTT---CTCTCACCTGAACCACC 1793887 Query 46337 AGCTTGCGCCCGACACCGT-GCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAG 46395 | || ||| | ||| | || ||| | ||||| || | || ||| ||||| Sbjct 1793886 GCCCTGATCCCAAGGTCGTTGAAGA-CATCATTGTCGAGGCCGTTGGTATCGAGCAGGAG 1793828 Query 46396 TTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCGAC 46455 || | || | ||| || ||| || |||||| ||||||||||| || |||||| | Sbjct 1793827 TTCCTCACTGACGCTCTTCCCTGTGGCCTGCTTGGCATGAACGCCAAGCTCATGTGCCAG 1793768 Query 46456 TACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCAC 46515 |||||||||||||| || ||||| || |||||| ||| | | |||| | | || Sbjct 1793767 TACATCGAGTTTGTCGCTGACCGTCTCCTCGTGGCCCTTGGCAACAAGAAGTACTACAAC 1793708 Query 46516 GCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTC 46575 | ||| || || || || ||| | ||||||||||| ||||| || || || ||| Sbjct 1793707 TCTGCCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAACTTCTTC 1793648 Query 46576 GAAAAGCGCGTCGGCGAGTATAAG 46599 || ||||| ||||| || ||| || Sbjct 1793647 GAGAAGCGTGTCGGTGACTATCAG 1793624 >seq27 Length=4901019 Score = 122 bits (134), Expect = 8e-23 Identities = 136/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||||||| |||||| ||||| ||||||||||| ||| ||| Sbjct 3950619 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 3950678 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | ||||||||||| || || || || || ||||| ||| || ||||| | | Sbjct 3950679 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 3950738 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || ||| | ||||||| ||||| ||||| ||| ||||| || || || || |||| Sbjct 3950739 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 3950798 Query 131225 AA 131226 || Sbjct 3950799 AA 3950800 >seq36 Length=2049559 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || | ||| | || |||||||| || |||||||| ||| Sbjct 284423 CCACCACGGAGGCGGAGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 284364 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| |||||||| || ||| |||| | |||||||||||| |||||| Sbjct 284363 AGAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGG 284304 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || || || ||||| | || | || |||| ||||| | Sbjct 284303 ATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCAACT 284244 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || ||||| || || |||||||| || ||||| Sbjct 284243 TCAAGAGTGATGGTCTTTCCGGTGAGGGTCTTTACGAAGATTTGCAT 284197 Score = 102 bits (112), Expect = 8e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || | || | ||| |||||||| ||||||||||| |||||| Sbjct 284195 CCACCACGGAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTC 284136 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| ||||||||||||||| | || | ||||||||||| ||||| Sbjct 284135 AGGGTACGGCCATCCTCAAGCTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCAGGAGGA 284076 Query 131128 ATTCCTTCTTTGTC 131141 || ||||| || || Sbjct 284075 ATGCCTTCCTTATC 284062 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| ||||| || || | ||| |||||| || || ||||| || Sbjct 284879 CCACCACGCAGACGGAGCACCAAGTGCAGGGTACTCTCCTTCTGGATATTGTAGTCAGAA 284820 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||||| |||||| |||||||| || ||| |||| | |||||||||||| || ||| Sbjct 284819 AGGGTGCGCCCGTCCTCCAGCTGCTTACCGGCGAAGATAAGACGCTGCTGGTCTGGGGGG 284760 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | || | || || | || || | Sbjct 284759 ATACCCTCCTTGTCCTGGATCTTGCTCTTAACGTTGTCGATCGTGTCAGATGATTCCACT 284700 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || || || || || ||||| ||||| Sbjct 284699 TCCAGCGTGATGGTCTTGCCAGTGAGTGTCTTGACAAAAATTTGCAT 284653 >seq10 Length=3304607 Score = 96.9 bits (106), Expect = 3e-15 Identities = 591/941 (63%), Gaps = 24/941 (3%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| ||||| ||||||| ||||| || | || | ||| || ||| |||| Sbjct 1363635 TTGACGACCTGGAACTCACCGGCCAGGACACGGCGGGAGTAGATGTTCGAGGTGTAGGGC 1363694 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || ||||||| ||| ||||| ||| ||| | || ||||||||| || ||| Sbjct 1363695 TCGAAGCACTCGTTGAAGCCGAGGATCTGACTGGTAGAGGCAGTGGGCATGGGAGCGACC 1363754 Query 145178 A--ATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCC 145235 | | | || ||||| | || || ||| | |||| || | | |||| |||| Sbjct 1363755 AGCAGACTG--TTGCGGACACCAGTCTCGGCGATCTTGGCCTTCAGAGAAGCCCAGTCCC 1363812 Query 145236 ATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGC 145295 | || ||| || | |||||||||||||||||||| ||||||| | ||||| Sbjct 1363813 AGAGGTCAGTGGGAGTACGGTCCCACATGTCGTACTGCAGGATGCCCTGCGAGACGGGGG 1363872 Query 145296 TGCCTTGAAAGGAACTGTAACTGCCCCAAGTT--TTGGCGAGCTCGCAACTCGCCTCCAG 145353 ||| | ||| ||| | || || | ||||| || ||| | || ||| Sbjct 1363873 AGCCGGGGTAGGTCTCGTA--GGTACCGAGCTGCTTGGCCAGGTCGGAGGAGGCAGTCAG 1363930 Query 145354 AGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTC 145413 || ||| || || |||||| || || |||| ||| | | || || | || Sbjct 1363931 GGCACCGTGGTAGATAGTCTCGAAGATCTGGATGTTCAGCTGTCTTGCCTCGGGGGAGTC 1363990 Query 145414 GTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGG 145473 | | |||| ||||| | |||||||| || || || | | || | | | ||||| Sbjct 1363991 GAAGGGCAGACGCAGAGCCAGGAAAGCATCAGCAAGACCGTTGACACCGAGGGCAATGGG 1364050 Query 145474 CCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAAT 145533 || || | ||||||| || | ||| || || || || |||||| || Sbjct 1364051 ACGGTGACGGAAGTTGCTCTTCTTGGCCTCGGGGACGGGGTAGTAGTTGATGTCGATGAT 1364110 Query 145534 TTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCG 145593 || |||||||| || || | |||| || | | | || | ||||| | | Sbjct 1364111 CTTGTTCAAGTTGCGAACGAGAACCTGGACAACCTCGTGAAGTTTGCCGAAGTCGTA-CT 1364169 Query 145594 AGCCTC-GTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCG 145652 ||| | | || | | || | || | ||| | || ||||| || ||||| || Sbjct 1364170 CGCCACGGGCAGCATCAACGAAAGTAGGAAGGGCAAGAGAAGCCAAGTTGCAAACAGCGA 1364229 Query 145653 TCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTC 145712 ||| || | | ||||| | | |||||| | ||||| ||| | || |||| Sbjct 1364230 CCTCATCAGGAGCACTGTACTCGATGATCTCAGTGCACAGGTTGGAGCTGCGAATAGTTC 1364289 Query 145713 CCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGC 145772 |||| || | ||| || || ||| ||||||| || |||||||| |||||| | || | Sbjct 1364290 CCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTACAGCATGAAGGGGTTAC 1364349 Query 145773 CAGTCTCCACCTGCGTCTCCACGAT---AAAACGGTGCAAGTCCTGCGC----ACGCACC 145825 ||||||| ||| | ||| | || | | | | || | ||| || | | | Sbjct 1364350 CAGTCTCAGTCTGGGCCTCAAGAATGGCATACCAGAGC---TTCTGAGCCTTAATGGTCT 1364406 Query 145826 TGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCG 145885 ||| || |||||||| | ||||| ||| |||||| |||| ||| | |||| Sbjct 1364407 TGC----GGCCACGGCCCTCCTTCTCGTACTTCTCGTAGAGAGCCTCGAACTCATCACCG 1364462 Query 145886 TAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCG 145945 ||| ||| | || || | || |||||| || | || | ||| | ||||| || Sbjct 1364463 TAGACATCAGCGAGACCAGAGGCCTCGTTGGGGCAGAAGAGAGTCCAGTCACCGTTAGCC 1364522 Query 145946 TTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTA 145986 | || |||| ||| |||| ||| || ||| || ||||| Sbjct 1364523 TCAACACGCTTCATGAACAGATCAGGAGTCCAGAGAGCGTA 1364563 >seq26 Length=2837646 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/139 (76%), Gaps = 1/139 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || || || | || | |||||||||||| || |||||||| || Sbjct 1000976 CCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 1001035 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| ||| |||| | ||||||||||| || ||| Sbjct 1001036 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 1001095 Query 131128 ATTCCTTCTTTGTC-GGTG 131145 || || || ||||| |||| Sbjct 1001096 ATACCCTCCTTGTCTGGTG 1001114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012434190080