Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq21 140 2e-28 seq10 140 2e-28 seq36 111 1e-19 >seq21 Length=13773 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 2404 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 2463 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 2464 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 2498 >seq10 Length=3304607 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 6022 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 5963 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 5962 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 5928 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 13969 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 13910 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 13909 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 13875 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 21913 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 21854 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 21853 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 21819 >seq36 Length=2049559 Score = 111 bits (122), Expect = 1e-19 Identities = 232/344 (67%), Gaps = 10/344 (3%) Strand=Plus/Plus Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGC--GCCAAGGTCGAGGGTAAGGGAAACGGTA 6258 ||||| |||||||| ||| | | | || | ||||||||||| || ||||| ||||||| Sbjct 1195386 TTCTATCGCTACAAGATG--GAGAAGCTCCAGGCCAAGGTCGAAGGCAAGGGCAACGGTA 1195443 Query 6259 TTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCT 6318 |||| ||||| | |||||| || ||||| ||| | ||| | || ||| | ||| Sbjct 1195444 TTAAGACCGTTGTCGTCAACCTGGACTCCGTCGCAAAGTCCCTCAGCCGTCCTCCTGCCT 1195503 Query 6319 ACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACG 6378 ||| | || || ||||| | |||||| || |||||| | | | | || ||| Sbjct 1195504 ACCTCATCAAGTACTTCGGTTTCGAACTCGGTGCTCAGGCTAACGCCAAGCCCACCGACG 1195563 Query 6379 AGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCT 6438 | |||| ||| | ||||| || || | | ||||||| ||||||| || || || | Sbjct 1195564 AACGCTGGATCATCAACGGTTCCCACGATGCCCCCAAGCTTCAGGACTACCTCGATGGGT 1195623 Query 6439 TTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCTTATTGTGT 6498 | || ||||||||| || || | | ||| | ||||| || ||||| ||| | Sbjct 1195624 TCATCTCCAAGTTTGTTCTCTGCAAGAAGTGCAAGAACCCCGAAACCGA------TGTCT 1195677 Query 6499 CTACCAAGAGAAACACCATCTCTCAGGGCTGCAAAGCGTGCGGT 6542 | | |||| | | ||| ||| || |||||| || || ||| Sbjct 1195678 CCATCAAGGATGAGAAGATCACTCTGGACTGCAAGGCCTGTGGT 1195721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946946905522