Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq10 309 6e-79 seq54 242 7e-59 >seq10 Length=3304607 Score = 309 bits (342), Expect = 6e-79 Identities = 1113/1720 (65%), Gaps = 67/1720 (4%) Strand=Plus/Plus Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796 ||| ||||||||| || || ||||||| |||| | || |||||||||||||||||| Sbjct 1363293 ACGGTGAACTGGATAGGAGCAGAGGCGGCCATGGTGCGCAAGTAGTACATGCCGGTCTTC 1363352 Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856 || || | |||| || || |||||||| || | ||| ||| || ||| Sbjct 1363353 AGACCCATCTTCCAGCCGGCGAAGTGCATGGAGGTGATCTTGCCCATGGTGGGCT----- 1363407 Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCT 243916 ||| ||| || ||| ||||||||| |||||||| | ||| | || || Sbjct 1363408 ----CCTT---CAGGTGGATGTTCAGGGACTGGGACTGGTCGATGTAGGCACCGCGGTCG 1363460 Query 243917 GCGGCCATGGTGATGAGGTCCTTCTG--AGATATCTCATACGCCGTCTTGTAGATGGGCT 243974 |||||||| | || || ||| |||| || || ||| |||||||||| || || Sbjct 1363461 GCGGCCATCTGCAGGATGTTACGCTGGGAGATTTCCCAGACG--GTCTTGTAGAGGGCCT 1363518 Query 243975 TGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGG 244034 ||| || |||| | ||||||||| || ||||| || | |||||| || Sbjct 1363519 TGATGTCGGCGGGAATGTTGGGGATGTTCTGGACGGAGCCGCCGTCGGCGATGATACGGT 1363578 Query 244035 TGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTG---T 244091 | |||||| ||| ||||| || | | | || ||| |||| ||| | | Sbjct 1363579 TCTTCATGTTGTCGGACCACAAACCGAGGTCGACAAGGTCCTT---CAGGAGCCAGGGGT 1363635 Query 244092 TCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCT 244151 | || ||||| ||||| || | ||| || ||||| ||||| ||| | || |||| Sbjct 1363636 TGACGACCTGGAACTCACCGGCCAGGACACGGCGGGAGTAGATGTTCGAGGTGTAGGGCT 1363695 Query 244152 CGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCA 244211 ||| || ||| || ||| || ||||| || ||||| |||||||| | |||| Sbjct 1363696 CGAAGCACTCGTTGAAGCCGAGGATCTGACTGGTAGAGGCAGTGGGCATGGGAGCGACCA 1363755 Query 244212 GCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACA 244271 |||||||||| | || || ||| | ||| ||| || | | || | || Sbjct 1363756 GCAGACTGTTGCGGACACCAG---TCTCG--GCGA--TCTTGGC-CTTCAGAGAAGCCCA 1363807 Query 244272 TGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGA 244331 ||| ||||||| | | | || |||||||||| ||||||| | |||| || Sbjct 1363808 GTCCC-AGAGGTCAGTGGGAGTACGGTCCCACATGTCGTACTGCAGGATGCCCTGCGAGA 1363866 Query 244332 CGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTC-G 244390 ||||| ||| ||||||| ||||| |||| ||| |||||| | || | | Sbjct 1363867 CGGGGGAGCCGGGGTAGGTCTCGTAGGTACCGAGCTGCTTGGCCAGGTCGGAGGAGGCAG 1363926 Query 244391 TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCG 244450 || ||||| ||| |||||| |||||||||||| |||||| | | |||| | | Sbjct 1363927 TC-AGGGCACCGTGGTAGATAGTCTCGAAGATCTGGATGTTCAGCTGTCTTGCCTCGGGG 1363985 Query 244451 CAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCG 244510 || |||||| | | || || ||| | || || || || | || |||| | | Sbjct 1363986 GAGTCGAAGGGCAGACGCAGAGCCAGGAAAGCATCAGCAAGACCGTTGACACCGAGGGCA 1364045 Query 244511 ATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCG 244570 ||||| | ||| || |||| | |||| ||||| |||||||| ||||| |||| Sbjct 1364046 ATGGGACGGTGACGGAAGTTGCTCTTCTTGGCCTCGGGGACGGGGTAGTAGTTGATGTCG 1364105 Query 244571 ATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCA-GCTGAAAGTC 244629 || | |||||| | |||||| || | |||| || ||| || || ||| ||| Sbjct 1364106 ATGATCTTGTTCAAGTTGCGAACGAGAACCTGGACAACCTCGTGAAGTTTGCCGAA-GTC 1364164 Query 244630 GTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGC 244689 ||||||| || ||| | | | | ||| | | ||||| | || Sbjct 1364165 GTACTCG-------CCACGGGCAGCATCAACG----AAAGTAGGA-AGGGCAAGAGAAGC 1364212 Query 244690 CAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTT 244749 || |||||| || || ||||| || | |||||| || ||||| ||||| ||||| Sbjct 1364213 CAAGTTGCAAACAGCGACCTCATCAGGAGCACTGTACTCGATGATCTCAGTGCACAGGTT 1364272 Query 244750 ACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTA 244809 || || || ||||||| || || ||| ||| |||||| || |||||||| Sbjct 1364273 GGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTA 1364332 Query 244810 GAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCT 244869 ||||||||||| || ||||| |||||| | || | | | |||||| | | Sbjct 1364333 CAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCATACCAGAGCTTCTG 1364392 Query 244870 AGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAA 244929 |||||| | ||| |||| | |||||| |||||| ||| || |||||||| Sbjct 1364393 AGCCTTAATGGTCTTGCGGCCACGGCCCTCCTTCTCGTACTTCTCGTAGAGAGCCTCGAA 1364452 Query 244930 CTCGGGGCCCCAGACCTCGTCTAGGCC--GGGGCACGACGCCGGGCACATGAGACTCCAC 244987 ||| || |||| || | || || || | || | ||||| | |||| |||| Sbjct 1364453 CTCATCACCGTAGACATCAGCGAGACCAGAGGCCTCGTTG--GGGCAGAAGAGAGTCCAG 1364510 Query 244988 TCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGG 245047 || ||| ||| || | || |||||| || || || ||||||| || | |||||| Sbjct 1364511 TCACCGTTAGCCTCAACACGCTTCATGAACAGATCAGGAGTCCAGAGAGCGTAGAAGAGA 1364570 Query 245048 TCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACG 245107 |||| || | || ||| || |||||| | || || | || || ||||| Sbjct 1364571 TCCCGGGCACGAACTTCTTCCTTACCGTGGTTCTTACGGAGATCGAGGAACTCGAAGACA 1364630 Query 245108 TCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGG 245167 || ||||||||||||||| ||||| || | || || || |||||||| || |||||| Sbjct 1364631 TCTGCGTGCCAGGGCTCCAGGTAGATGGCAAACGCACCAGGGCGCTTGTTACCACCCTGG 1364690 Query 245168 TCCACCATCCTCTCGAGC-GCG---TTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGA 245223 | || | | || || | | ||||| | || || |||| || || || || || Sbjct 1364691 T----CAACGTAGCGGGCAGTGTTATTGAACACACGGAGCATAGGAACAATACCATTGGA 1364746 Query 245224 GTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT--- 245280 | ||| ||||| || ||||||| || || | | || ||| | || |||| Sbjct 1364747 GGAGCCATTGGTTCCACCAATGTAGGAACCGGTGGCAC---GGATGC-GGTGAACATTCA 1364802 Query 245281 -GCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGC 245339 || | || || ||| |||||| || | || ||| |||| | ||||| || | Sbjct 1364803 AACCAATGCCACCAGCGGTCTTGGAAATCATAGCACAGGTCTTAAGAGTGTCGTAGATAC 1364862 Query 245340 CCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGC 245399 |||| |||||||| | ||||| || ||| ||||| || | |||||||||| ||| Sbjct 1364863 CCTCAATGCTGTCTGCGGACATGTCGACCAGGAAGCAAGAAGCAAGCTGGGGCTGGGGAG 1364922 Query 245400 TGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 || | |||||| ||||||||| ||||||||| ||||| Sbjct 1364923 TGGCGGCGTTGAAGAGAGTGGGGGAGGCGTGGGTGAAGTA 1364962 >seq54 Length=3157102 Score = 242 bits (268), Expect = 7e-59 Identities = 329/448 (73%), Gaps = 17/448 (4%) Strand=Plus/Minus Query 42705 CTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTC 42764 ||||| ||||| | || |||||||| ||||||||||| || ||||||||||||||||| Sbjct 1794061 CTGGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGTTCCTTCGCCTCCATCTTC 1794002 Query 42765 TGGCTCAAGCAGAAGGTGTC-GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAG 42823 ||||||||| || | ||| ||||||||| ||||||||||| ||||||||||| | Sbjct 1794001 TGGCTCAAGAAGCGTG-GTCTGATGCCCGGTCTCACCTTCTCCAACGAACTCATTTCTCG 1793943 Query 42824 GGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAA 42883 |||||||| || || | || || || || ||||| ||||| ||||| | ||| Sbjct 1793942 TGACGAGGGTCTCCACACTGATTTCGCTTGTCTCCTCTTCTCT---CACCTGAACCACC- 1793887 Query 42884 GCCCT----CGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGG 42939 ||||| | |||| || | |||||| |||||||| | |||||| ||| Sbjct 1793886 GCCCTGATCCCAAGGTC---GTTGAAGACATCATTGTCGAGGCCGTTGGTATCGAGCAGG 1793830 Query 42940 AGTTCCTCACGCAGTCGCTGCCCGTGTC-CCTGGTCGGCATGAACCACGACCTCATGTGC 42998 |||||||||| | | || ||| ||| |||| | ||||||||| | | ||||||||| Sbjct 1793829 AGTTCCTCACTGACGCTCTTCCC-TGTGGCCTGCTTGGCATGAACGCCAAGCTCATGTGC 1793771 Query 42999 AAGTACATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTA 43057 |||||||| ||| ||||| |||| |||||| ||| | ||| || | ||| Sbjct 1793770 CAGTACATCGAGTTTGTCGCTGACCGTCTCCTCGTGGCCCTTGGCAACAAGAAGTA-CTA 1793712 Query 43058 CAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTT 43117 |||| | | |||||||||||| |||||| |||||| ||| |||||||||||||| Sbjct 1793711 CAACTCTGCCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAACTT 1793652 Query 43118 TTTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||||||||||| |||| ||||| ||| Sbjct 1793651 CTTCGAGAAGCGTGTCGGTGACTATCAG 1793624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338468137120