Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq10 224 1e-53 seq54 138 1e-27 >seq10 Length=3304607 Score = 224 bits (248), Expect = 1e-53 Identities = 573/867 (66%), Gaps = 19/867 (2%) Strand=Plus/Plus Query 114462 TAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTA 114521 |||||||||| | || |||| || || |||| | |||||| | || ||||||| | Sbjct 1364194 TAGGAAGGGCAAGAGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACTGTACTCGA 1364253 Query 114522 TAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTG 114581 | || || || |||| || || || ||| || |||| |||||| || || ||| Sbjct 1364254 TGATCTCAGTGCACAGGTTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTCT 1364313 Query 114582 TGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAA 114641 |||| || ||||||||||| |||||| | || | || ||||| || |||| || |||| Sbjct 1364314 TGTTGCAAGCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAA 1364373 Query 114642 TAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGG---CTCGCCCCTCCTCCTCG 114697 | || | ||||| | || | | || | ||| ||| | || ||||||| |||| Sbjct 1364374 TGGCATACCAGAGCTTCTGAGCCTT----AATGGTCTTGCGGCCACGGCCCTCCTTCTCG 1364429 Query 114698 TACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTA 114757 ||||| |||||| || || ||||| ||||| | | || | ||| || | |||| Sbjct 1364430 TACTTCTCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCGAGACCAGAGGCCTCG 1364489 Query 114758 TCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGG 114817 | ||||||||||||| ||| | ||| ||||||||||||||||||| || || || Sbjct 1364490 TTGGGGCAGAAGAGAGTCCAGTCACCGTTAGCCTCAACACGCTTCATGAACAGATCAGGA 1364549 Query 114818 ATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGC 114877 |||||||||| ||||||||||||| ||| ||||||| | || || || ||| Sbjct 1364550 GTCCAGAGAGCGTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACCGTGGTTCTTACGG 1364609 Query 114878 AACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCC 114937 | || | || || | || ||| |||||||| || |||||||| | || | || | Sbjct 1364610 AGATCGAGGAACTCGAAGACATCTGCGTGCCAGGGCTCCAGGTAGATGGCAA---ACGCA 1364666 Query 114938 TTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGC 114991 | | || |||| |||||| || || | || ||| ||| || || || ||| Sbjct 1364667 CCAGGGCGCTTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTATTGAACACACGGAGC 1364726 Query 114992 ATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTG 115051 || |||| ||||||| || |||||| || || | ||| || |||| | | Sbjct 1364727 ATAGGAACAATACCATTGGAGGAGCCATTGGTTCCACCAATGTAGGAACCGGTGGCACGG 1364786 Query 115052 ACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTG 115111 | || | | || |||||| || || || ||| || || || || | | Sbjct 1364787 ATGCGGTGAACATTCAAACCAATGCCACCAGCGGTCTTGGAAATCATAGCACAGGTCTTA 1364846 Query 115112 AGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGAC 115171 ||| || ||||||| || || || ||| | | ||| |||||||| | Sbjct 1364847 AGAGTGTCGTAGATACCCTCAATGCTGTCTGCGGACATGTCGACCAGGAAGCAAGAAGCA 1364906 Query 115172 ATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATAC-C 115230 | || ||| || || | ||||||||||| || || | |||||| |||| ||| Sbjct 1364907 AGCTGGGGCTGGGGAGTGGCGGCGTTGAAGAGAGTGGGGGAGGCGTGGGTGAA-GTACTT 1364965 Query 115231 TTGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGAT 115290 |||||||||| | ||||||||| | | | ||||| || ||||| ||||||| Sbjct 1364966 TTGGGACATCAAGTGGTAGGTCTCAATGGCCTTCTCGATGTCCTCGCCGTGGATACCGAC 1365025 Query 115291 CGAGACCCGCATAAACATGTATTGGGG 115317 | || ||||| | || || ||||| Sbjct 1365026 AGCAACGCGCATCAGCAGGTGCTGGGG 1365052 >seq54 Length=3157102 Score = 138 bits (152), Expect = 1e-27 Identities = 341/514 (66%), Gaps = 10/514 (2%) Strand=Plus/Plus Query 125759 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 125818 ||||| || || ||||||||||||||||| ||||| || ||| | ||| |||||| Sbjct 1793628 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATG 1793687 Query 125819 AAATCAAATGGGTTCTTTGAGTTCCA--AATTGTTGGCACCCCAATCTGTTTGAGGAGAC 125876 || || || ||||| ||||| | | || ||| || || |||||||| Sbjct 1793688 AAGTCGAAGGGGTTGGCAGAGTTGTAGTACTTCTTGTTGCC--AAGGGCCACGAGGAGAC 1793745 Query 125877 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 125936 | || | ||| |||| ||||||| |||| || | |||||| || | ||| || Sbjct 1793746 GGTCAGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCAAGCAGGCCAC 1793805 Query 125937 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGT 125996 | || || ||||| || |||| ||| ||| || | ||||| || | |||| | | Sbjct 1793806 AGGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATACCAACGGCCTCGACAATGATGTCTT 1793865 Query 125997 GAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCTT 126056 || | | |||| | | | || |||||| || || || Sbjct 1793866 CAACGACCTTGGGATCAGGGCGGTGGTTCAGGTGAGAGAAGAGGAGACAAGCGAAATCAG 1793925 Query 126057 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGAC 126116 |||||||||||||||||| || |||||||| || |||||| || || ||||| |||| Sbjct 1793926 TGTGGAGACCCTCGTCACGAGAAATGAGTTCGTTGGAGAAGGTGAGACCGGGCATCAGAC 1793985 Query 126117 CCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACAC 126176 | |||||||| | |||||| || | || ||||| ||||||||||| ||||| ||| Sbjct 1793986 CACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAAGATACCCTCGACAG 1794045 Query 126177 ACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCA---AACCACTTCA 126233 ||||| |||| |||||| ||| |||| ||||| |||||| | ||| | Sbjct 1794046 CAGCGAAGGCAACCAGACGCGAAGCGAAGG---TCGACTCAGTGTCATTGATCCAACGGA 1794102 Query 126234 TCGCCCACTGCGCCTTTTTCTCGATACACGGGAC 126267 | ||||||| ||||| || | ||||| || || Sbjct 1794103 TGGCCCACTCGGCCTTCTTGGCAATACAGGGAAC 1794136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353137050960