Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq36 147 2e-30 seq27 96.9 4e-15 >seq36 Length=2049559 Score = 147 bits (162), Expect = 2e-30 Identities = 172/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 41980 GACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAG 42039 |||| || | | ||| | |||||| |||| || |||||||| || |||||||| |||| Sbjct 284881 GACCACCACGCAGACGGAGCACCAAGTGCAGGGTACTCTCCTTCTGGATATTGTAGTCAG 284822 Query 42040 CCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTG 42099 || || ||| |||| || ||||||||||| ||||| || || ||||||||||| | | Sbjct 284821 AAAGGGTGCGCCCGTCCTCCAGCTGCTTACCGGCGAAGATAAGACGCTGCTGGTCTGGGG 284762 Query 42100 GCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 42158 | | | |||||||||| || | || | | | ||| | | | |||||| |||||| Sbjct 284761 GGATACCCTCCTTGTCC-TGGATCTTGCTCTTAACGTTGTCGATCGTGTCAGATGATTCC 284703 Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || | ||||||||| ||||| || || ||||| ||||| |||||||| Sbjct 284702 ACTTCCAGCGTGATGGTCTTGCCAGTGAGTGTCTTGACAAAAATTTGCAT 284653 Score = 105 bits (116), Expect = 7e-18 Identities = 143/194 (74%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || | ||||| || | || || |||||||| || ||||| Sbjct 284388 CTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAA 284329 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 ||||| ||||||||||||| || | | |||||| ||| ||| | || | |||| || Sbjct 284328 GATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTATCC-TGAATCTTGGACTTGA-CG 284271 Query 42136 TCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194 | | | | |||||| || || || || | |||||||| || || || || |||||| Sbjct 284270 TTGTCGATGGTGTCGGAAGACTCAACTTCAAGAGTGATGGTCTTTCCGGTGAGGGTCTTT 284211 Query 42195 ACAAAGATTTGCAT 42208 || ||||||||||| Sbjct 284210 ACGAAGATTTGCAT 284197 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 |||||||| || ||||| || | ||| || || | || || ||||||||||| || || Sbjct 284615 TCCTTTTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCAAAG 284556 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || || || |||||||| | || | || ||||| ||| ||| ||| |||| | Sbjct 284555 ATAAGACGTTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGGATCTTTGACTTGACGTTA 284496 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | || || ||| || || || | |||||||| || || || || ||||| || Sbjct 284495 TCGATGGTATCCGACGACTCTACCTCCAGAGTGATGGTCTTTCCGGTGAGGGTCTTCACG 284436 Query 42198 AAGATTTGCAT 42208 || |||||||| Sbjct 284435 AAAATTTGCAT 284425 >seq27 Length=4901019 Score = 96.9 bits (106), Expect = 4e-15 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078 |||| || || ||||| || ||| || || | || || |||||||| || ||||| | Sbjct 3950619 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 3950678 Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138 | || ||||||||||| | || | || |||||||||| ||| || |||| ||| | Sbjct 3950679 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 3950737 Query 42139 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | ||||||||||| || || |||| || ||||| || ||||| || ||||| || Sbjct 3950738 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 3950797 Query 42198 AA 42199 || Sbjct 3950798 AA 3950799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212379010080