Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03-
04] 62 sequences; 34,340,580 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq54 131 2e-25
seq27 93.3 4e-14
seq36 89.7 5e-13
>seq54
Length=3157102
Score = 131 bits (144), Expect = 2e-25
Identities = 168/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 52614 GAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGC 52673
||||| || | |||||| ||||||| | || | ||| || || | ||||| |||
Sbjct 1793851 GAGGCCGTTGGTATCGAGCAGGAGTTCCTCACTGACGCTCTTCCCTGTGGCCTGCTTGGC 1793792
Query 52674 ATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAG 52733
|||||||| || ||||||| |||||||||||||||| || || ||||| | |||
Sbjct 1793791 ATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTTGTCGCTGACCGTCTCCTCGTGGCC 1793732
Query 52734 CTCGGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTC 52792
|| || || | | ||||||| |||| || ||| || || || || ||| | ||| ||
Sbjct 1793731 CTTGG-CAACAAGAAGTACTACAACTCTGCCAACCCCTTCGACTTCATGGAGTCCATCTC 1793673
Query 52793 GCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTATAAG 52841
|| | |||||||||||||| ||||||||||| ||||| || ||| ||
Sbjct 1793672 CCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTATCAG 1793624
>seq27
Length=4901019
Score = 93.3 bits (102), Expect = 4e-14
Identities = 133/184 (72%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
|||| || |||||||||||||||| || || |||||||| || || |||| |||
Sbjct 3950619 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 3950678
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542
| || ||||| ||||| || || || || || ||||| || | || || || | |||
Sbjct 3950679 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTC-CTGGATCTTGGTCTTGACGTTG 3950737
Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602
|| | ||||||| ||||||| || |||| || | || ||||| ||||| || || ||
Sbjct 3950738 -TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 3950796
Query 138603 AAAA 138606
|||
Sbjct 3950797 GAAA 3950800
>seq36
Length=2049559
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|| |||||||| |||||||||||| || || || ||||| || || ||||||| |
Sbjct 284618 GATTCCTTTTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCA 284559
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| ||||| || ||||| || || || ||||| || || ||| ||| || |
Sbjct 284558 AAGATAAGACGTTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGGATCTTTGACTTGACG 284499
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | ||| || | |||||| ||||| | || | || || || || || || ||
Sbjct 284498 TTATCGATGGTATCCGACGACTCTACCTCCAGAGTGATGGTCTTTCCGGTGAGGGTCTTC 284439
Query 138601 ACAAAAATCTGCAT 138614
|| ||||| |||||
Sbjct 284438 ACGAAAATTTGCAT 284425
Score = 87.8 bits (96), Expect = 2e-12
Identities = 139/196 (71%), Gaps = 4/196 (2%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||| | ||| || ||||| || || || ||||
Sbjct 284390 GACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCCTCAAGCTGCTTTCCGGCG 284331
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539
|||| |||||||| ||||| ||||| ||||| || || || ||| | || | || |
Sbjct 284330 AAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTATC-CTGAATCTTGGACTTGAC 284272
Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
||| || | |||||||| ||||| || || | || | || || || || || || |
Sbjct 284271 GTTG-TCGATGGTGTCGGAAGACTCAACTTCAAGAGTGATGGTCTTTCCGGTGAGGGTCT 284213
Query 138599 TTACAAAAATCTGCAT 138614
|||| || || |||||
Sbjct 284212 TTACGAAGATTTGCAT 284197
Score = 84.2 bits (92), Expect = 2e-11
Identities = 125/174 (72%), Gaps = 4/174 (2%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| ||||||||||||||||||| ||||| ||||| || || || || |
Sbjct 284162 GACTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGCTGCTTGCCTGCG 284103
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTA 138538
| || || ||||| ||||| ||||| || ||||| || || ||| | || | ||
Sbjct 284102 AAAATCAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATC-CTGAATCTTGGACTTGAC 284044
Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCA 138592
|||| || | |||||||| ||||| ||||| | || | || || || ||||
Sbjct 284043 ATTG-TCGATGGTGTCGGAAGACTCAACCTCAAGAGTGATGGTCTTGCCGGTCA 283991
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262015396640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |