Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq27 104 2e-17 seq36 84.2 2e-11 >seq27 Length=4901019 Score = 104 bits (114), Expect = 2e-17 Identities = 133/181 (73%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| |||| || ||||| ||| || ||||| || || ||| ||||| Sbjct 3950621 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 3950680 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044 | |||||||| || || || ||||||||||||||| ||| || ||||| |||| || Sbjct 3950681 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTG-TC 3950739 Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 || |||||| | |||||| |||| ||| | || || || ||||| || || || || Sbjct 3950740 GATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 3950799 Query 127105 A 127105 | Sbjct 3950800 A 3950800 >seq36 Length=2049559 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||| || | ||| ||| || || |||||||| || Sbjct 284879 CCACCACGCAGACGGAGCACCAAGTGCAGGGTACTCTCCTTCTGGATATTGTAGTCAGAA 284820 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || ||||| || || ||| |||| | |||||||| || || || Sbjct 284819 AGGGTGCGCCCGTCCTCCAGCTGCTTACCGGCGAAGATAAGACGCTGCTGGTCTGGGGGG 284760 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| ||| || ||| | |||| |||| ||||| | || || Sbjct 284759 ATACCCTCCTTGTCCTGGATCTTGCTCTTAACGTTG-TCGATCGTGTCAGATGATTCCAC 284701 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | || ||||| || || || || |||||||| ||||| Sbjct 284700 TTCCAGCGTGATGGTCTTGCCAGTGAGTGTCTTGACAAAAATTTGCAT 284653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500431486880