Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq10 205 1e-47 seq54 134 2e-26 >seq10 Length=3304607 Score = 205 bits (226), Expect = 1e-47 Identities = 567/864 (66%), Gaps = 13/864 (2%) Strand=Plus/Plus Query 116423 TAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTA 116482 |||||||||| | || |||| || || |||| | |||||| | || ||||||| | Sbjct 1364194 TAGGAAGGGCAAGAGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACTGTACTCGA 1364253 Query 116483 TAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTG 116542 | || || || |||| || || || ||| || |||| |||||| || || ||| Sbjct 1364254 TGATCTCAGTGCACAGGTTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTCT 1364313 Query 116543 TGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAA 116602 |||| || ||||||||||| ||||| | || | || ||||| || |||| || |||| Sbjct 1364314 TGTTGCAAGCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAA 1364373 Query 116603 TAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGG---CTCGCCCCTCCTCCTCG 116658 | || | ||| | | || | | || | ||| ||| | || ||||||| |||| Sbjct 1364374 TGGCATACCAGAGCTTCTGAGCCTT----AATGGTCTTGCGGCCACGGCCCTCCTTCTCG 1364429 Query 116659 TACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTA 116718 ||||| |||||| ||||| ||||| ||||| | || | ||| || | |||| Sbjct 1364430 TACTTCTCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCGAGACCAGAGGCCTCG 1364489 Query 116719 TCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGG 116778 | || |||||||||| ||| | ||| ||||||| ||||||||||| || || || Sbjct 1364490 TTGGGGCAGAAGAGAGTCCAGTCACCGTTAGCCTCAACACGCTTCATGAACAGATCAGGA 1364549 Query 116779 ATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGC 116838 ||||||| || ||||||||||||| ||| ||||||| | || || || ||| Sbjct 1364550 GTCCAGAGAGCGTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACCGTGGTTCTTACGG 1364609 Query 116839 AACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCC 116898 | || | || || | || ||| |||||||| || |||||||| | || | | || Sbjct 1364610 AGATCGAGGAACTCGAAGACATCTGCGTGCCAGGGCTCCAGGTAGATGGCAAACGCACCA 1364669 Query 116899 TTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATT 116955 ||| |||| |||||| || || | || || || || || || ||||| Sbjct 1364670 GGGCGCTTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTATTGAACACACGGAGCATA 1364729 Query 116956 GGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACA 117015 |||| ||||||| || |||||| || || | ||| || | |||| | || Sbjct 1364730 GGAACAATACCATTGGAGGAGCCATTGGTTCCACCAATGTAGGAACCGGTGGCACGGATG 1364789 Query 117016 TCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGA 117075 ||| | | || |||||| || || || ||| || || || || | | ||| Sbjct 1364790 CGGTGAACATTCAAACCAATGCCACCAGCGGTCTTGGAAATCATAGCACAGGTCTTAAGA 1364849 Query 117076 CTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATT 117135 || ||||||| || || || ||| | | ||| |||||||| | | Sbjct 1364850 GTGTCGTAGATACCCTCAATGCTGTCTGCGGACATGTCGACCAGGAAGCAAGAAGCAAGC 1364909 Query 117136 TGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATAC-CTTG 117194 || ||| || || | ||||||||||| || || | |||||| |||| ||| ||| Sbjct 1364910 TGGGGCTGGGGAGTGGCGGCGTTGAAGAGAGTGGGGGAGGCGTGGGTGAA-GTACTTTTG 1364968 Query 117195 GGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGA 117254 ||||||| | ||||||||| | | | ||||| || ||||| ||||||| | Sbjct 1364969 GGACATCAAGTGGTAGGTCTCAATGGCCTTCTCGATGTCCTCGCCGTGGATACCGACAGC 1365028 Query 117255 GACCCGCATAAACATGTATTGGGG 117278 || ||||| | || || ||||| Sbjct 1365029 AACGCGCATCAGCAGGTGCTGGGG 1365052 >seq54 Length=3157102 Score = 134 bits (148), Expect = 2e-26 Identities = 297/441 (67%), Gaps = 6/441 (1%) Strand=Plus/Plus Query 127232 TAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCATA 127291 ||||| ||||| ||||||||||||||||| ||||| ||| | ||| ||| |||||| Sbjct 1793628 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATG 1793687 Query 127292 AAATCAAATGGGTTCTTTGAGTTCCA--AATTGTTGGCACCCCAATCTGTTTGAGGAGAC 127349 || || || ||||| ||||| | | || ||| || || |||||||| Sbjct 1793688 AAGTCGAAGGGGTTGGCAGAGTTGTAGTACTTCTTGTTGCC--AAGGGCCACGAGGAGAC 1793745 Query 127350 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 127409 | || | ||| |||| ||||||| |||| || | |||||| || | ||| || Sbjct 1793746 GGTCAGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCAAGCAGGCCAC 1793805 Query 127410 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGT 127469 | || || ||||| || |||| ||| ||| || | || || || | |||| | | Sbjct 1793806 AGGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATACCAACGGCCTCGACAATGATGTCTT 1793865 Query 127470 GAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTT-GAAGAGTTCCACAGCAAACTCT 127528 || | |||| | | | | | || |||||| ||| || || Sbjct 1793866 CAACGACCTTGGGATCAGGGCGGTGGT-TCAGGTGAGAGAAGAGGAGACAAGCGAAATCA 1793924 Query 127529 TGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGA 127588 |||||||||||||||||| || |||||||| || |||||| ||||| ||||| ||| Sbjct 1793925 GTGTGGAGACCCTCGTCACGAGAAATGAGTTCGTTGGAGAAGGTGAGACCGGGCATCAGA 1793984 Query 127589 CCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACA 127648 || |||||||| | |||||| || | || || |||||||||||||| ||||| ||| Sbjct 1793985 CCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAAGATACCCTCGACA 1794044 Query 127649 CACGCGAACGCAAATAGACGC 127669 ||||| |||| |||||| Sbjct 1794045 GCAGCGAAGGCAACCAGACGC 1794065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506724531920