Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq36 168 8e-37 seq27 136 4e-27 seq26 107 2e-18 >seq36 Length=2049559 Score = 168 bits (186), Expect = 8e-37 Identities = 169/217 (78%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||| |||| ||||||||||| |||||||||||||| || || |||||| | Sbjct 284868 ACGGAGCACCAAGTGCAGGGTACTCTCCTTCTGGATATTGTAGTCAGAAAGGGTGCGCCC 284809 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| || |||||||| |||||||| || | ||||||||||| | || | | |||||| Sbjct 284808 GTCCTCCAGCTGCTTACCGGCGAAGATAAGACGCTGCTGGTCTGGGGGGATACCCTCCTT 284749 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| |||||| |||| | ||| | | | |||||| |||||||| |||| ||||| Sbjct 284748 GTCCTGGATCTTGCTCTT-AACGTTGTCGATCGTGTCAGATGATTCCACTTCCAGCGTGA 284690 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| ||||| || || || || ||||| |||||||| Sbjct 284689 TGGTCTTGCCAGTGAGTGTCTTGACAAAAATTTGCAT 284653 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| |||||||| | || || |||||||| |||||||| Sbjct 284388 CTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAA 284329 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||||| || | | |||||| ||| ||||| ||||| ||| Sbjct 284328 GATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTATCCTGAATCTTGGACTTGA-CGT 284270 Query 46522 CGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| || || || || | |||||||| || || || || || || | Sbjct 284269 TGTCGATGGTGTCGGAAGACTCAACTTCAAGAGTGATGGTCTTTCCGGTGAGGGTCTTTA 284210 Query 46581 CAAAGATTTGCAT 46593 | ||||||||||| Sbjct 284209 CGAAGATTTGCAT 284197 Score = 102 bits (112), Expect = 9e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| ||||||||||| || ||||| | || || |||||||| ||||| || Sbjct 284615 TCCTTTTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCAAAG 284556 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | || |||||||| | || | || ||||| ||| |||||| ||||| | Sbjct 284555 ATAAGACGTTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGGATCTTTGACTTGACGTTA 284496 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | || || ||| || || |||| |||||||| || || || || || || || Sbjct 284495 TCGATGGTATCCGACGACTCTACCTCCAGAGTGATGGTCTTTCCGGTGAGGGTCTTCACG 284436 Query 46583 AAGATTTGCAT 46593 || |||||||| Sbjct 284435 AAAATTTGCAT 284425 Score = 86.0 bits (94), Expect = 7e-12 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || ||||||||| || || || | || || ||||||||||| ||||| Sbjct 284160 CTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGCTGCTTGCCTGCGAA 284101 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||||| | || | || ||||| ||| ||||| ||||| | Sbjct 284100 AATCAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGAATCTTGGACTTGACATT 284041 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCA 46571 | | |||||| || || || || | |||||||| ||||| |||| Sbjct 284040 GTCGATGGTGTCGGAAGACTCAACCTCAAGAGTGATGGTCTTGCCGGTCA 283991 >seq27 Length=4901019 Score = 136 bits (150), Expect = 4e-27 Identities = 141/182 (77%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||| || ||||| | || |||||||||||||||||||| | Sbjct 3950619 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 3950678 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| |||||||||||| | || | || |||||||||| |||||| |||||| ||| | Sbjct 3950679 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 3950737 Query 46524 -CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||||||| || || || | || ||||| || |||||||| || || || Sbjct 3950738 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 3950797 Query 46583 AA 46584 || Sbjct 3950798 AA 3950799 >seq26 Length=2837646 Score = 107 bits (118), Expect = 2e-18 Identities = 83/99 (84%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || |||||||| |||| |||||||||||||||||||| Sbjct 1001011 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1001070 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 |||| |||||||||||| | || | | ||||||||| Sbjct 1001071 GATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTC 1001109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237961940240