Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03-
04] 62 sequences; 34,340,580 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq54 161 1e-34
seq27 127 2e-24
seq36 113 5e-20
seq26 82.4 8e-11
>seq54
Length=3157102
Score = 161 bits (178), Expect = 1e-34
Identities = 185/248 (75%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 133195 TCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACC 133254
|| ||||| | ||||||||| ||| || || ||||| ||||| || |||||| | |
Sbjct 1794266 TCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGAGCCTCGGGAATC 1794325
Query 133255 TGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCG 133314
|| || ||| ||||||||||||||| |||||||||||||| |||||| ||| |||
Sbjct 1794326 TGGACCTCTCCGCTGAAACGCTCGACCAGGTTTTCGTTGACGATACCGTCGGAGGCAGCG 1794385
Query 133315 AAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAG 133371
|| ||||| || ||||| |||||| | ||||| | ||||| | ||| | ||||
Sbjct 1794386 AAGAAGGCAAGGACGTGGGAGATGAAGTAACGCTCATCATCGTTGAGGCGGTTGTGCCAG 1794445
Query 133372 TCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTT 133431
||| | |||||||| || || | |||||| ||||||| || || |||||||| ||
Sbjct 1794446 TCGTGGAGATCCTTGGATAGATCAATCTCCTCAGCGGTCCAGAAAGAGGCCTCGGCCTTC 1794505
Query 133432 TTGTACAT 133439
||||||||
Sbjct 1794506 TTGTACAT 1794513
Score = 147 bits (162), Expect = 2e-30
Identities = 345/513 (67%), Gaps = 6/513 (1%)
Strand=Plus/Plus
Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650
||| || ||| || ||||| || || || ||||| || || || || || || |
Sbjct 1793609 CATGACACCAGCCTTCTGATAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGC 1793668
Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGAT 132710
|| ||| ||| | ||| || || ||||||||||| | |||||||| ||| || |
Sbjct 1793669 CAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGGCAGAGTTGTAGTACTTCTTGTTGCC 1793728
Query 132711 CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAAT 132769
||| | ||||| || | ||| || || ||||||||||| || ||||| | || || |
Sbjct 1793729 AAGGGCCACGAGGAGACGGTCAGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTT 1793788
Query 132770 TAAGTCCCAGCAGACGCACCGGCA-GCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACC 132828
| | || ||||| | ||| || | | || || ||||| || |||||||| | ||
Sbjct 1793789 CATG-CCAAGCAGGC-CACAGGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATACCAACG 1793846
Query 132829 GCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTC-GGCCGTTGCACCAAATGCTTGAA 132887
|| ||| | ||| || |||| | | | || || || || || || |||
Sbjct 1793847 GCCTCGACAATGATGTCTTCAACGACCTTGG-GATCAGGGCGGTGGTTCAGGTGAGAGAA 1793905
Query 132888 CATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAA 132947
| | ||||| || || || | |||||||| | ||||||||||||||| |||
Sbjct 1793906 GAGGAGACAAGCGAAATCAGTGTGGAGACCCTCGTCACGAGAAATGAGTTCGTTGGAGAA 1793965
Query 132948 AGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGA 133007
|| | |||||||| || || || || |||||||| || |||| |||||| || ||
Sbjct 1793966 GGTGAGACCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGA 1794025
Query 133008 AAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTT 133067
||||||| |||||||| || ||||| || ||||| ||| |||| || | || |
Sbjct 1794026 GAAGAAGATACCCTCGACAGCAGCGAAGGCAACCAGACGCGAAGCGAAGGTCGACTCAGT 1794085
Query 133068 GCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100
| |||||| || | ||||| ||||||||
Sbjct 1794086 GTCATTGATCCAACGGATGGCCCACTCGGCCTT 1794118
>seq27
Length=4901019
Score = 127 bits (140), Expect = 2e-24
Identities = 140/183 (77%), Gaps = 4/183 (2%)
Strand=Plus/Minus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || || ||||| || ||||| ||| ||||||||||| | | ||||| | |
Sbjct 3950799 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 3950740
Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370
| |||| | |||| || |||| ||||| ||||| |||||| | ||||| ||||| |
Sbjct 3950739 GACAACG--TCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCGCC 3950682
Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430
| || | ||| ||||| ||||| || || | |||||||| | ||||||||||||||| |
Sbjct 3950681 TGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGA 3950622
Query 38431 AGG 38433
|||
Sbjct 3950621 AGG 3950619
>seq36
Length=2049559
Score = 113 bits (124), Expect = 5e-20
Identities = 156/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| |||||||| || ||||| || || |||||||| | || || ||| | ||
Sbjct 284197 ATGCAAATCTTCGTAAAGACCCTCACCGGAAAGACCATCACTCTTGAAGTTGAGTCTTCC 284256
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || || || | || || ||||| || || |||||||
Sbjct 284257 GACACCATCGACAACG-TCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCTCCCGACCA 284315
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| || || ||||| || || | ||||| ||| |||||||||
Sbjct 284316 GCAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGATGGTCGCACTCTCTCCGACTACAA 284375
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||| ||||| | || || ||| | || || ||
Sbjct 284376 CATCCAGAAGGAGTCCACTCTCCATCTCGTCCTCCG 284411
Score = 100 bits (110), Expect = 3e-16
Identities = 154/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || ||||| || || |||||||| | || || ||| | |
Sbjct 284425 ATGCAAATTTTCGTGAAGACCCTCACCGGAAAGACCATCACTCTGGAGGTAGAGTCGTCG 284484
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | | |||| | || ||| |||| || || || || || ||| | |||||
Sbjct 284485 GATACCATCGATAACG-TCAAGTCAAAGATCCAGGATAAGGAAGGCATCCCCCCTGACCA 284543
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| || || || | || || || ||||| || || | |||||||| |||||||||
Sbjct 284544 GCAACGTCTTATCTTTGCCGGTAAGCAGCTTGAGGATGGCCGCACCCTGTCCGACTACAA 284603
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||||||||| | || ||||| | || || |||
Sbjct 284604 CATCCAAAAGGAATCCACTCTGCACCTTGTCCTCCGT 284640
>seq26
Length=2837646
Score = 82.4 bits (90), Expect = 8e-11
Identities = 84/110 (76%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396
||||| ||||| || ||| | ||||| ||||| || || | ||| ||||| ||||| ||
Sbjct 1001109 GACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 1001050
Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446
|||| ||||| || |||||||||||||| ||||| |||| || ||
Sbjct 1001049 GACGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTTCA 1001000
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172412366080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |