Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq8 385 6e-102 seq35 113 6e-20 >seq8 Length=3887683 Score = 385 bits (426), Expect = 6e-102 Identities = 776/1149 (68%), Gaps = 9/1149 (1%) Strand=Plus/Minus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| | | ||| ||||| ||||| | || ||||| || || |||||||||||||| Sbjct 1256243 TCACCAGACAGGATAGCGGCCTGGACTGCGGCACCGTAGGCAACGGCCTCATCGGGGTTG 1256184 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || || ||| || ||| || | || || | | | || || || ||| Sbjct 1256183 ATGGACTTGTTGGCTTCCTT---GTTGAAGAAGTCGGAAACGAGCTTCTGGATCTTGGGG 1256127 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || |||||||| | ||||| || | || || || || ||||| | | Sbjct 1256126 ATACGGGTAGAACCACCGACGAGGACGATCTCGTGGACGGAGGACTTGTCAATCTTAGCG 1256067 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || || ||||| || ||||| |||||| | |||| || || ||| Sbjct 1256066 TCGCGGAGGACACGCTCGACGGGCTCCATGGTGCCACGGAAGAGGTCCTGGCAGAGCTCC 1256007 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || ||||| |||||||| ||||| |||||||| || | || ||| | | || || || Sbjct 1256006 TCGAAACGGGCACGGGTGATGGAAGTATAGAAGTCGATACCCTCGAAGAGAGAGTCGATC 1255947 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 ||||||| || || || | ||||| | || ||||| || ||||| || || || || Sbjct 1255946 TCAATGGAGGTCTGAGCAGCAGAAGAGAGGGTACGCTTAGCACGCTCGCAAGCAGTGCGG 1255887 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429 | |||||| |||||||| | ||| | | || ||||| || || || || ||||| Sbjct 1255886 AGACGACGGAGGGCACGGGCGTTGGTAGTCAGGTCCTTCTTGTGCTTGCGCTTGAACTCG 1255827 Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489 | |||||| | ||| | ||||| || |||||||| | ||| ||||| || Sbjct 1255826 TTGACGAAGTGGTTGACGAGACGGTTGTCGAAGTCCTCACCACCAAGGTGAGTATCACCA 1255767 Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549 || || | ||||| || |||||||| | || ||| | | | || ||||| || ||| Sbjct 1255766 GCAGTGGACTTGACCTCGAAGATACCCTCCTCGATGGTGAGGAGAGACACATCGAAGGTA 1255707 Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609 ||||||||||| || || || || ||||| || | || ||||| || |||||| Sbjct 1255706 CCACCACCCAGATCGAAGATCAGGACGTTGCGCTCACCCTCGACCTTCTTGTCAAGACCG 1255647 Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669 || |||||||| || || || || || ||||| ||||| || ||| || |||||||| Sbjct 1255646 TAAGCGATAGCAGCAGCAGTGGGCTCGTTAATGATACGGAGGACGTTGAGACCAGCAATG 1255587 Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACG 7729 | || || || || || || || || || ||||| |||||||| ||||| || | | Sbjct 1255586 AGACCGGCGTCCTTGGTAGCCTGACGCTGAGAGTCGTTGAAGTAGGCGGGGACAGTGATG 1255527 Query 7730 ACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGA 7789 || |||| |||| | |||||| || | || ||| | || ||| ||||| || Sbjct 1255526 ACAGCGTTGTTGACGGTGCCACCGAGGTAGGCCTCGGCGGTCTCACGCATCTTGGTGAGG 1255467 Query 7790 ACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCA 7849 | ||| | || || || || | | ||||| || ||||| || || || || || Sbjct 1255466 ATCATAGCGGAGATTTCCTCGGGGGTGAACTGCTTGACCTCACCCTTGAACTCGACCTCG 1255407 Query 7850 ATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCT 7909 | | ||| || | ||| ||| ||||| | | ||| | ||||||||| | Sbjct 1255406 ACGACGGGCTT---GGTAGCCTTCTCGATGACCTTGAAAGGCCAGTGCTTCATATCGGCC 1255350 Query 7910 TGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTT 7969 ||||||| |||| ||||| | || || |||||||| || || || || |||| Sbjct 1255349 TGGACCTCAGCGTCCTGGAACTTACGGCCAATGAGACGCTTGGCGTCGAAGACAGTGTGG 1255290 Query 7970 TTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCC 8029 | |||||||||||| |||||||| || || || ||||| ||||| || | || Sbjct 1255289 TGGGGGTTCATGGCGACCTGGTTCTTGGCGGCATCACCGATGAGACGCTC---GGTGTCG 1255233 Query 8030 GTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACG 8089 || || ||||| | || ||||| || || || || |||||||| || || ||||| | | Sbjct 1255232 GTGAAAGCGACAAAGGAGGGGGTGGTGCGGTTACCCTGGTCGTTGGCGATGATTTCAATG 1255173 Query 8090 CGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGCT 8149 ||||| | | |||| || || || || || || ||||| | ||||||||||| || Sbjct 1255172 CGGTCATCACGGAAGACACCCACACAGGAGTAGGTGGTTCCCAGATCAATACCGACGGCG 1255113 Query 8150 TGAGTCATT 8158 ||| |||| Sbjct 1255112 GGAGCCATT 1255104 >seq35 Length=1646803 Score = 113 bits (124), Expect = 6e-20 Identities = 240/357 (67%), Gaps = 11/357 (3%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||| | ||| || || || ||||| || ||| || |||| ||| Sbjct 785036 TCAAAGTCCTCACCACCAAGGTGGGTGTCACCAGCGGTAGCCAAGACCTCGAAGACACCG 785095 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAG---GTCAAAAATGAGT 7573 ||||| | | |||||||| || ||||||||||| || || | ||||| Sbjct 785096 TTGTCAATCGACAGGAGGGAAACATCGAAAGTACCACCACCAAGATCGTAGACAATGA-- 785153 Query 7574 ACGTTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 | | || ||||| | |||| || |||||||| |||||||| || || || || Sbjct 785154 -----CCTGGCGCTCGTCACCGGTCTTGTCCAGACCGTAGGCGATAGCGGCGGCAGTGGG 785208 Query 7633 TTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTG 7692 || || | || ||| || ||| || || || || || | || || || || || || Sbjct 785209 CTCGTTGACAACACGGAGGACGTTGAGACCGGCGATGGTACCGGCGTCCTTGGTGGCCTG 785268 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 || || | ||||| |||||||| || || || || || |||| ||||| |||| || Sbjct 785269 ACGCTGGGCGTCGTTGAAGTAGGCGGGAACGGTAACAACAGCGTGGGTGACGGTCTTGCC 785328 Query 7753 GAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 ||| || || || || || ||||| || |||||||| | || ||||| || Sbjct 785329 GAGGTAGCCCTCAGCAATCTCCTTCATCTTACCCAGAACCATAGCGGAGATCTCCTC 785385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132307772080