Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq10 176 6e-39 seq54 150 2e-31 seq27 107 2e-18 >seq10 Length=3304607 Score = 176 bits (194), Expect = 6e-39 Identities = 338/493 (69%), Gaps = 13/493 (3%) Strand=Plus/Minus Query 111922 ATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTG 111981 |||||||| |||| ||||| || || || || ||| || ||||| || |||| | || Sbjct 1364742 ATGGTATTGTTCCTATGCTCCGTGTGTTCAATAACACTGCCCGCTACGTTGACCAGGGTG 1364683 Query 111982 GGCGTCGCAAGGGATCTA------TCGCAGTCTATCTTGAGCCATGGCACGCGGATATCA 112035 | | |||| | || | || |||| || ||||| |||||||| ||| || Sbjct 1364682 G---TAACAAGCGCCCTGGTGCGTTTGCCATCTACCTGGAGCCCTGGCACGCAGATGTCT 1364626 Query 112036 TGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCT 112095 | |||||||| || | ||| ||||| ||| | || || | || ||| ||||||| Sbjct 1364625 TCGAGTTCCTCGATCTCCGTAAGAACCACGGTAAGGAAGAAGTTCGTGCCCGGGATCTCT 1364566 Query 112096 TCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGT 112155 ||| ||||||||||| ||| ||||| ||||||||| | ||||||| | || | ||| Sbjct 1364565 TCTACGCTCTCTGGACTCCTGATCTGTTCATGAAGCGTGTTGAGGCTAACGGTGACTGGA 1364506 Query 112156 CTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAG 112215 ||||||| || || || |||| | |||||| | |||| | ||||| ||||| || | Sbjct 1364505 CTCTCTTCTGCCCCAACGAGGCCTCTGGTCTCGCTGATGTCTACGGTGATGAGTTCGAGG 1364446 Query 112216 CCCTCTACACAAAGTACGAGGAAGAAAGTCG-GGCGACTGCGACGGTGCCAGCTGCCGAT 112274 | |||||| ||||||||| | || | || ||| | ||| | ||| | || Sbjct 1364445 CTCTCTACGAGAAGTACGAGAAGGAGGGCCGTGGCCGC-AAGACCATTAAGGCT-CAGAA 1364388 Query 112275 G-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAA 112333 | | ||| | || ||||| || | || || |||||||||| || | ||||| ||||| Sbjct 1364387 GCTCTGGTATGCCATTCTTGAGGCCCAGACTGAGACTGGTAACCCCTTCATGCTGTACAA 1364328 Query 112334 AGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCT 112393 || || || ||| | ||||| || || ||||| |||| || || |||||||| Sbjct 1364327 GGATGCTTGCAACAAGAAGAGCAACCAGAAGAACCTGGGAACTATTCGCAGCTCCAACCT 1364268 Query 112394 CTGTACAGAAATC 112406 || || || ||| Sbjct 1364267 GTGCACTGAGATC 1364255 >seq54 Length=3157102 Score = 150 bits (166), Expect = 2e-31 Identities = 163/215 (76%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 102109 CAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT---TGATACAAAGT 102165 ||||||| |||||| ||||| || || ||||| || ||| | ||| || ||| Sbjct 1794138 CAGTTCCCTGTATTGCCAAGAAGGCCGAGTGGGCCATCCGTTGGATCAATGACACTGAGT 1794079 Query 102166 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 102225 || |||| ||| ||| || | || || || ||| ||||||||||||||||||| Sbjct 1794078 CGA---CCTTCGCTTCGCGTCTGGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCTG 1794022 Query 102226 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 102285 |||||||| | | || | |||||||||||||| ||||| ||||| |||||| ||||| Sbjct 1794021 GTTCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGTCTCACCTTCT 1793962 Query 102286 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 ||||||| || || |||||||||||||| |||||| Sbjct 1793961 CCAACGAACTCATTTCTCGTGACGAGGGTCTCCAC 1793927 >seq27 Length=4901019 Score = 107 bits (118), Expect = 2e-18 Identities = 221/325 (68%), Gaps = 19/325 (6%) Strand=Plus/Minus Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 16034 || |||||||| || || | || |||||| | ||| ||| || |||||||| | Sbjct 2130072 AAGCCATCCATTTCAGTGAGAATCTGGTTCAGAGTGCTTTCACGCTCATCATTTCCG--- 2130016 Query 16035 ATACCACCAGCACT-GCGTTG--------CTTTCCCACGGCATCAATCTCATCAATGAAG 16085 |||||| || | | ||| |||||| | |||||| || |||||||||||| Sbjct 2130015 ---CCACCAACATTTGACTTGGCTCGGGACTTTCCAATGGCATCGATTTCATCAATGAAG 2129959 Query 16086 ACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCC 16145 | ||||| || || | ||| ||| | |||||||| || ||||| || || Sbjct 2129958 ATAATGCAGGGAGTGTTCTTGCGCGCGTTGGCGAAGAGATCACGGACACGAGAGGGACCG 2129899 Query 16146 ACACCAACAAACATCTCCACAAAGTTTG--CGGCGGAACATTGGATGAAGGGGACATTAG 16203 ||||| || |||||||| || || | | | | | ||| || | |||||| || || Sbjct 2129898 ACACCGACGAACATCTCAACGAACTCGGAACCACTG-ACACTGTA-GAAGGGCACGCCAG 2129841 Query 16204 ATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGA 16263 ||||||| ||| |||| ||| || || |||||||| ||||| || ||| | ||| | Sbjct 2129840 ATTCACCGGCAGTGGCCTTGGCAAGCAGGGTCTTACCAGTACCGGGAGGACCAGAGAGAA 2129781 Query 16264 GGGCACCTCGTGGAATCTTGGCGCC 16288 ||||| || || |||||||| || Sbjct 2129780 TAGCACCGCGGGGGATCTTGGCACC 2129756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741918924640