Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq10 199 5e-46 seq27 118 1e-21 >seq10 Length=3304607 Score = 199 bits (220), Expect = 5e-46 Identities = 504/757 (67%), Gaps = 27/757 (4%) Strand=Plus/Plus Query 110330 TGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGAT 110389 |||| || | || || || |||| |||||| || ||| |||| ||||||||| | Sbjct 1364245 TGTACTCGATGATCTCAGTGCACAGGTTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGT 1364304 Query 110390 TCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTG 110449 | || |||||| |||||||| || |||||| | ||| ||||||| || ||||| | Sbjct 1364305 TGCTCTTCTTGTTGCAAGCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCAGTCTGGG 1364364 Query 110450 ACTTGAGAATGGCCTTCCATA-CATCGGCGGCGG---GGACAGTTGCGTTAGCGA-GACC 110504 || |||||||| | ||| | | || | | | || | ||||| || | | || Sbjct 1364365 CCTCAAGAATGGCATACCAGAGCTTCTGAGCCTTAATGGTC--TTGCG---GCCACGGCC 1364419 Query 110505 TTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACC 110564 |||| ||||||||| ||| | |||| || || | ||||| ||||||| ||||| Sbjct 1364420 CTCCTTCTCGTACTTCTCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCGAGACC 1364479 Query 110565 CTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCT---CCTCAACCCTCTTCAT 110621 |||| || ||| |||||||| | ||| | |||| | ||||||| | |||||| Sbjct 1364480 AGAGGCCTCGTTGGGGCAGAAGAGAGTCCAGT---CACCGTTAGCCTCAACACGCTTCAT 1364536 Query 110622 GAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACC 110681 |||||| |||||| |||| | || |||| || || ||| |||| | ||||| | ||| Sbjct 1364537 GAACAGATCAGGAGTCCAGAGAGCGTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACC 1364596 Query 110682 TTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGAC 110741 ||||| || || || | || || | || ||| | |||||| || || || |||| Sbjct 1364597 GTGGTTCTTACGGAGATCGAGGAACTCGAAGACATCTGCGTGCCAGGGCTCCAGGTAGAT 1364656 Query 110742 AGCGATGGATCCCTTACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATT 110795 || | | || | | || ||| |||||| ||| ||||| || ||| ||| Sbjct 1364657 GGCAAACGCACC---AGGGCGCTTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTATT 1364713 Query 110796 GAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGA 110855 ||| || | ||||||||||| ||| |||| ||| ||||| || || | ||| ||| Sbjct 1364714 GAACACACGGAGCATAGGAACAATACCATTGGAGGAGCCATTGGTTCCACCAATGTAGGA 1364773 Query 110856 CTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTG 110915 ||||||| ||| ||| | || || |||||| ||||| || ||| ||| Sbjct 1364774 ACCGGTGGCACGGATGCGGTGAACATTCAAACCAATGCCACCAGCGGTCTTGGAAATCAT 1364833 Query 110916 TGCACA-CTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTA 110974 ||||| ||| | || || | || ||||| ||||| ||||| || | | | Sbjct 1364834 AGCACAGGTCT-TAAGAGTGTCGTAGATACCCTCAATGCTGTCTGCGGACATGTCGACCA 1364892 Query 110975 GAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCAT 111034 | |||||||||| | ||| || | || || | || |||||||| || || | || | Sbjct 1364893 GGAAGCAAGAAGCAAGCTGGGGCTGGGGAGTGGCGGCGTTGAAGAGAGTGGGGGAGGCGT 1364952 Query 111035 GAATGAACAGACCTTGGGACATCTTGTTGTATGTGTC 111071 | |||| |||||||||| || ||| || || Sbjct 1364953 GGGTGAAGTACTTTTGGGACATCAAGTGGTAGGTCTC 1364989 Score = 105 bits (116), Expect = 8e-18 Identities = 242/361 (67%), Gaps = 14/361 (4%) Strand=Plus/Plus Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTC---GATGAT 109556 ||||| ||||| ||||| |||||| | ||| || || || ||||| | |||| | Sbjct 1363421 GTTCAGGGACTGGGACTGGTCGATGTAGGCACCGCGGTCGGCGGCCATCTGCAGGATGTT 1363480 Query 109557 ACACTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTC 109616 || || || ||||||||||| |||||||| | |||||| || ||||||||| Sbjct 1363481 ACGCT---GGGAGATTTCCCAGACGGTCTTGTAGAGGGCCTTGATGTCGGCGGGAATGTT 1363537 Query 109617 CACGATGTTTTGAATAGAGCCACCAGCCTTCACC-ATGAGA---TCCTTCATCTCTTTCG 109672 |||||| || | ||||| ||| || | |||| | | |||||| | | | Sbjct 1363538 GGGGATGTTCTGGACGGAGCC----GCCGTCGGCGATGATACGGTTCTTCATGTTGTCGG 1363593 Query 109673 ACCAGAGACCGACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCAC 109732 |||| | ||||| | || || | | || |||||| || || |||| Sbjct 1363594 ACCACAAACCGAGGTCGACAAGGTCCTTCAGGAGCCAGGGGTTGACGACCTGGAACTCAC 1363653 Query 109733 CAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGC 109792 | || || || ||| ||||||||| | |||||||| ||||| ||||| ||| || Sbjct 1363654 CGGCCAGGACACGGCGGGAGTAGATGTTCGAGGTGTAGGGCTCGAAGCACTCGTTGAAGC 1363713 Query 109793 CTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGAC 109852 | ||||| || || || || |||||||||||||| | || |||||||| |||| || Sbjct 1363714 CGAGGATCTGACTGGTAGAGGCAGTGGGCATGGGAGCGACCAGCAGACTGTTGCGGACAC 1363773 Query 109853 C 109853 | Sbjct 1363774 C 1363774 >seq27 Length=4901019 Score = 118 bits (130), Expect = 1e-21 Identities = 276/411 (67%), Gaps = 9/411 (2%) Strand=Plus/Minus Query 11592 GAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGGG 11651 ||| || |||||||| ||||||| |||||| | || |||||||||||| || | Sbjct 2130073 GAAGCCATCCATTTCAGTGAGAATCTGGTTCAGAGTGCTTTCACGCTCATCATTTCCGCC 2130014 Query 11652 CATACCACCTGCC---GAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGAT 11708 | || || | | || ||| || | || || || ||||| ||||| | || Sbjct 2130013 ACCAACATTTGACTTGGCTCGGGACTTTCCAATGGCATCGATTTCATCAATGAAGATAAT 2129954 Query 11709 ACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACC 11768 || || ||| || || | |||| || ||||| ||||| | || ||||| Sbjct 2129953 GCAGGGAGTGTTCTTGCGCGCGTTGGCGAAGAGATCACGGACACGAGAGGGACCGACACC 2129894 Query 11769 TACGAACATCTCAACGAAGTTTGCGGCAGA-ACACTGAATGAAGGGAACATTAGACTCAC 11827 ||||||||||||||||| | | || |||||| | |||||| || ||| |||| Sbjct 2129893 GACGAACATCTCAACGAACTCGGAACCACTGACACTGTA-GAAGGGCACGCCAGATTCAC 2129835 Query 11828 CAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGC 11887 | || |||| || || || |||||||| ||||| || | ||||| ||||| || | Sbjct 2129834 CGGCAGTGGCCTTGGCAAGCAGGGTCTTACCAGTACCGGGAGGACCAGAGAGAATAGCAC 2129775 Query 11888 CACGGGGGATCTTGGCACC--ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCAC 11945 | ||||||||||||||||| |||| | | ||||| |||| || ||||||| || Sbjct 2129774 CGCGGGGGATCTTGGCACCTAGCTTC--TTGAACCGCTCCGGCTGCTGGAGGAAGCTGAC 2129717 Query 11946 AATCTCCTCAAGTTCCTCCTTGGCGGAGTCGATACCCTCAACATCGGTGAA 11996 | ||| || || ||||||| || |||||| | ||||| | ||| Sbjct 2129716 GAATTCCATAATCTCAACCTTGGCTTCATCCATACCCGCGACATCCGCGAA 2129666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975543543600