Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq10 242 4e-59 seq54 111 2e-19 seq27 100 3e-16 >seq10 Length=3304607 Score = 242 bits (268), Expect = 4e-59 Identities = 577/865 (67%), Gaps = 19/865 (2%) Strand=Plus/Plus Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 |||||||| | || ||||| ||||||||||| |||||| | | ||||||| | Sbjct 1364196 GGAAGGGCAAGAGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACTGTACTCGATG 1364255 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 || || || |||| |||||| || ||| || |||| ||||| ||||| ||||| ||| Sbjct 1364256 ATCTCAGTGCACAGGTTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTCTTG 1364315 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 ||||| ||||||||||| |||||| |||| | || ||||| ||||| | || ||||| Sbjct 1364316 TTGCAAGCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATG 1364375 Query 106637 GCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTT--GGCC-CGTCCCTCCGCCTCGTA 106692 || | ||| | | || | | || ||||| || |||| || |||||| |||||| Sbjct 1364376 GCATACCAGAGCTTCTGAGCCT----TAATGGTCTTGCGGCCACGGCCCTCCTTCTCGTA 1364431 Query 106693 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 106752 ||| |||||| || || ||||| ||||| | || | |||||| | |||| || Sbjct 1364432 CTTCTCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCGAGACCAGAGGCCTCGTT 1364491 Query 106753 TGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 106812 || ||||| |||| ||| | ||| ||||||| ||||||||||| || || ||| | Sbjct 1364492 GGGGCAGAAGAGAGTCCAGTCACCGTTAGCCTCAACACGCTTCATGAACAGATCAGGAGT 1364551 Query 106813 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 106872 ||| || | | |||||||| | ||| | ||||| | ||| ||||| || | Sbjct 1364552 CCAGAGAGCGTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACCGTGGTTCTTACGGAG 1364611 Query 106873 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGA 106926 || |||||||| | || ||| |||||||| ||||| || |||| || | || Sbjct 1364612 ATCGAGGAACTCGAAGACATCTGCGTGCCAGGGCTCCAGGTAGATGGCAAACGCACCAGG 1364671 Query 106927 TCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCAT 106986 | ||| | ||| | || | || ||||| || ||| || || || || ||||| Sbjct 1364672 GCGCTTGTTA---CCACCCTGGTCAACGTAGCGGGCAGTGTTATTGAACACACGGAGCAT 1364728 Query 106987 TGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC 107046 |||| |||||||| || ||||| || || | ||| || |||| | | Sbjct 1364729 AGGAACAATACCATTGGAGGAGCCATTGGTTCCACCAATGTAGGAACCGGTGGCACGGAT 1364788 Query 107047 ATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 107106 || | | || ||||| || ||||| ||| || || ||||| | |||| Sbjct 1364789 GCGGTGAACATTCAAACCAATGCCACCAGCGGTCTTGGAAATCATAGCACAGGTCTTAAG 1364848 Query 107107 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 107166 ||| | |||||||| | || ||| | || ||| ||||||||| | | Sbjct 1364849 AGTGTCGTAGATACCCTCAATGCTGTCTGCGGACATGTCGACCAGGAAGCAAGAAGCAAG 1364908 Query 107167 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATAC-CTT 107225 ||| || || || | || |||||||| || || | ||||| |||| ||| || Sbjct 1364909 CTGGGGCTGGGGAGTGGCGGCGTTGAAGAGAGTGGGGGAGGCGTGGGTGAA-GTACTTTT 1364967 Query 107226 GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGG 107285 |||||||| || ||| ||||| | | | || ||||| || |||||||| |||| | Sbjct 1364968 GGGACATCAAGTGGTAGGTCTCAATGGCCTTCTCGATGTCCTCGCCGTGGATACCGACAG 1365027 Query 107286 CCACACGCATAAACATGTATTGGGG 107310 | || ||||| | || || ||||| Sbjct 1365028 CAACGCGCATCAGCAGGTGCTGGGG 1365052 >seq54 Length=3157102 Score = 111 bits (122), Expect = 2e-19 Identities = 153/213 (72%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 |||||||||||| || || ||||| ||||| || |||||| || || ||||| ||||| Sbjct 1793927 GTGGAGACCCTCGTCACGAGAAATGAGTTCGTTGGAGAAGGTGAGACCGGGCATCAGACC 1793986 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | ||| | || | | ||| || || ||||||||||||||||| ||| Sbjct 1793987 ACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAAGATACCCTCGACAGC 1794046 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA---AACCATTTCAT 117461 || || |||| || ||| ||||||| |||| |||||| | ||| || Sbjct 1794047 AGCGAAGGCAACCAGACGCGAAGCGAAGG---TCGACTCAGTGTCATTGATCCAACGGAT 1794103 Query 117462 TGCCCATTTCGCCTTCTTCTCAATACATGGTAC 117494 ||||| | |||||||| ||||||| || || Sbjct 1794104 GGCCCACTCGGCCTTCTTGGCAATACAGGGAAC 1794136 >seq27 Length=4901019 Score = 100 bits (110), Expect = 3e-16 Identities = 166/236 (70%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 9362 CTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGAT 9421 |||||| | |||||| || ||||||||||||| ||| || || || | ||| ||| | Sbjct 2129989 CTTTCCAATGGCATCGATTTCATCAATGAAGATAATGCAGGGAGTGTTCTTGCGCGCGTT 2129930 Query 9422 TTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG- 9480 | |||||||| || || | || || ||||| || |||||||| || || | | Sbjct 2129929 GGCGAAGAGATCACGGACACGAGAGGGACCGACACCGACGAACATCTCAACGAACTCGGA 2129870 Query 9481 -CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9539 | | | ||| || | |||||| || ||||||||| ||| |||| ||| || || Sbjct 2129869 ACCACTG-ACACTGTA-GAAGGGCACGCCAGATTCACCGGCAGTGGCCTTGGCAAGCAGG 2129812 Query 9540 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595 |||||||| ||||| || ||| | ||| | ||||| || || |||||||| || Sbjct 2129811 GTCTTACCAGTACCGGGAGGACCAGAGAGAATAGCACCGCGGGGGATCTTGGCACC 2129756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980342764880