Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq36 152 1e-31 seq10 113 1e-19 seq27 109 1e-18 seq26 89.7 1e-12 >seq36 Length=2049559 Score = 152 bits (168), Expect = 1e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || ||||||||||| || || || ||||| |||| ||||| | ||||| || Sbjct 284405 ACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCCTCA 284346 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| ||||| || || || || || ||| Sbjct 284345 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTATCCTGA 284286 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || |||||||| ||| || |||||||| || | |||||| Sbjct 284285 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCAACTTCAAGAGTGATGGTCTTT 284226 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || |||||||| | |||||| Sbjct 284225 CCGGTGAGGGTCTTTACGAAGATTTGCAT 284197 Score = 152 bits (168), Expect = 1e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| |||||||| || ||||| || ||||| |||| || || | ||||| || Sbjct 284633 ACAAGGTGCAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCA 284574 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| || |||||||| ||||| ||||| || || |||||||| || || || Sbjct 284573 AGCTGCTTACCGGCAAAGATAAGACGTTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGG 284514 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || ||| ||||||||| || ||||| ||||| || || || || || | |||||| Sbjct 284513 ATCTTTGACTTGACGTTATCGATGGTATCCGACGACTCTACCTCCAGAGTGATGGTCTTT 284454 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | |||||| Sbjct 284453 CCGGTGAGGGTCTTCACGAAAATTTGCAT 284425 Score = 143 bits (158), Expect = 6e-29 Identities = 144/187 (77%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| |||||||| || ||||| ||||| ||| || || | ||||| || Sbjct 284177 ACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCATCCTCA 284118 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| |||||||| || || || || ||||| |||||||||||||| || || ||| Sbjct 284117 AGCTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGA 284058 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || |||||||| ||| || || ||||| || | ||||| Sbjct 284057 ATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCAAGAGTGATGGTCTTG 283998 Query 195112 CCTGTCA 195118 || |||| Sbjct 283997 CCGGTCA 283991 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 194949 CTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAA 195008 ||| || || |||||||| || | ||| || | ||| || || ||||||||||| ||||| Sbjct 284844 CTCCTTCTGGATATTGTAGTCAGAAAGGGTGCGCCCGTCCTCCAGCTGCTTACCGGCGAA 284785 Query 195009 GATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTT 195068 |||||| || || |||||||| || || || || ||||| || || || ||| ||||| Sbjct 284784 GATAAGACGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGGATCTTGCTCTTAACGTT 284725 Query 195069 CTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTAC 195128 || || ||||| || ||||||||| || || | ||||| || || | || || || Sbjct 284724 GTCGATCGTGTCAGATGATTCCACTTCCAGCGTGATGGTCTTGCCAGTGAGTGTCTTGAC 284665 Query 195129 GAACACTTGCAT 195140 || | |||||| Sbjct 284664 AAAAATTTGCAT 284653 >seq10 Length=3304607 Score = 113 bits (124), Expect = 1e-19 Identities = 193/280 (69%), Gaps = 0/280 (0%) Strand=Plus/Minus Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGG 160648 |||||||| |||||||| | ||||| ||||||||| | || | | || || || ||| Sbjct 1364566 TTCTACGCTCTCTGGACTCCTGATCTGTTCATGAAGCGTGTTGAGGCTAACGGTGACTGG 1364507 Query 160649 AGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAG 160708 | || ||||| ||||| || || |||| || | |||||| || ||| ||||||||| Sbjct 1364506 ACTCTCTTCTGCCCCAACGAGGCCTCTGGTCTCGCTGATGTCTACGGTGATGAGTTCGAG 1364447 Query 160709 ACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAGGTCGTGAAGGCCCAAGAA 160768 |||| || || | ||||| || ||||| | | | ||| | | ||||| || | Sbjct 1364446 GCTCTCTACGAGAAGTACGAGAAGGAGGGCCGTGGCCGCAAGACCATTAAGGCTCAGAAG 1364387 Query 160769 CTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATACAAG 160828 || ||| || ||| |||| ||||| ||| |||| ||||| || |||||| Sbjct 1364386 CTCTGGTATGCCATTCTTGAGGCCCAGACTGAGACTGGTAACCCCTTCATGCTGTACAAG 1364327 Query 160829 GATGCCATCTGTCGCAAGAGTAACCAGAAGAACTTTGGAA 160868 ||||| | ||||| |||||||||||| | |||| Sbjct 1364326 GATGCTTGCAACAAGAAGAGCAACCAGAAGAACCTGGGAA 1364287 >seq27 Length=4901019 Score = 109 bits (120), Expect = 1e-18 Identities = 134/182 (74%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || || || ||||| ||| || || | ||||| ||||||||||| || |||||||| Sbjct 3950621 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 3950680 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 || || || ||||| || |||||||| || ||||| || || || ||||||||| || Sbjct 3950681 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 3950740 Query 195073 ATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129 |||||||| ||| || || || ||||||| ||||| || |||| || || ||| Sbjct 3950741 ATGGTGTCGCTCGA---CTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 3950797 Query 195130 AA 195131 || Sbjct 3950798 AA 3950799 >seq26 Length=2837646 Score = 89.7 bits (98), Expect = 1e-12 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| || ||||| || || || ||||| || | |||||| | || || ||| Sbjct 1000994 ACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCGTCCTCG 1001053 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 |||||||| || |||||||| || || || ||||| || || || || || |||||| Sbjct 1001054 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCT 1001110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109480718655554