Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq36 87.8 1e-11 seq8 86.0 5e-11 >seq36 Length=2049559 Score = 87.8 bits (96), Expect = 1e-11 Identities = 156/223 (70%), Gaps = 6/223 (3%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAGTT 563313 ||||||||| ||||| || || || ||| ||||| || ||||| || | || || Sbjct 284643 GAGACGGAGGACAAGGTGCAGAGTGGATTCCTTTTGG--ATGTTGTAGTCGGACAGGGTG 284586 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | ||| ||||| || || |||||||| ||||| | |||||| ||||| || || ||| Sbjct 284585 CGGCCATCCTCAAGCTGCTTACCGGCAAAGATAAGACGTTGCTGGTCAGGGGGGATGCCT 284526 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACAT-TCGAG 563432 || ||||| || || ||| || || || || ||||| | || | | || || Sbjct 284525 TCCTTATCCTGGATCTTTGACTTGACGTTATCGATGGTATCCGAC-GACTCTACCTCCAG 284467 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||| | || || || || || || || ||||||||||||||| Sbjct 284466 AGTGATGGTCTTTCCGGTGAGGGTCTTCACGAAAATTTGCATA 284424 >seq8 Length=3887683 Score = 86.0 bits (94), Expect = 5e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 || || || ||||| || || || || || ||||| || ||||| ||||| || || || Sbjct 1255522 GCTGTCATCACTGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGACGCC 1255581 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 || | |||||||| || || || || ||||| || || || || ||||||||||| | Sbjct 1255582 GGTCTCATTGCTGGTCTCAACGTCCTCCGTATCATTAACGAGCCCACTGCTGCTGCTATC 1255641 Query 550520 GCATATGGACTTGATAA 550536 || || || ||||| || Sbjct 1255642 GCTTACGGTCTTGACAA 1255658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029292721160380