Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq54 145 9e-29 seq10 145 9e-29 seq27 131 2e-24 >seq54 Length=3157102 Score = 145 bits (160), Expect = 9e-29 Identities = 174/234 (74%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 868700 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 868759 || || || || ||| |||||| |||||||||||||| | || ||||| ||||||| Sbjct 1793628 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATG 1793687 Query 868760 CACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGG 868819 | ||| ||||||| | ||||||| ||| | | || || | | |||| || ||| Sbjct 1793688 AAGTCGAAGGGGTTGGCAGAGTTGTAGTACTTCTTGTTGCCAAGGGCCACGAGGAGACGG 1793747 Query 868820 TCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCAC- 868878 || ||||||||||||||||||||||||||||| |||||||||||| | || ||||| Sbjct 1793748 TCAGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCAAGCAG-GCCACA 1793806 Query 868879 CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGAT 868932 || || | || | | ||||| | |||||| | ||||||||||| ||||| Sbjct 1793807 GGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATACCAACGGCCTCGACAATGAT 1793860 Score = 114 bits (126), Expect = 2e-19 Identities = 252/372 (68%), Gaps = 17/372 (5%) Strand=Plus/Minus Query 1726685 TGCGGCTGGGCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCCACGCTCCCGTCGGTGCCG 1726744 ||||| || | |||||||| | |||||||| ||| | || | | || || |||||| Sbjct 1079818 TGCGGGTGCGAGGCGGCGCCAATGGCGTCGACGGCCACGGTCAGGTTGCCATCTGTGCCG 1079759 Query 1726745 TTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCG 1726804 |||||| ||||||||| | | ||| |||| |||| ||||||||||| |||| |||| Sbjct 1079758 TTCTTGTAGCCGATGGGGAAAGACAGACCCGAGGCCAGCTCGCGGTGCAGCTGGGACTCG 1079699 Query 1726805 GTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCA---AATAAGGGGCCACC 1726861 || || || ||||| | |||||| ||| | |||||| |||| | | |||| Sbjct 1079698 GTTGTACGGGCGCCGATCGCGCCCAACGAGATCAGGTCCGCCAGGTACTGCGGGG----- 1079644 Query 1726862 AGA-GGACT-GAGAAACTCGACGGCCACGGGCTGATCG--ACGGCGACGACGAGATCGCG 1726917 ||| || | || | |||| ||| | ||| || || || | | | || ||| Sbjct 1079643 AGATGGTGTCCAGCATCTCGCTGGCGATAGGCAGACCGGTACTG-GTC----AGGTCGGT 1079589 Query 1726918 CAACAGGCGGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGGG 1726977 |||| || ||| | || || | | | | | | | | |||||| |||||| Sbjct 1079588 GTACAGCTTACGGGACACGCGGAGACCCTTGTTGATGTTGTAGGTCTCGTCGATGTCGGG 1079529 Query 1726978 GTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCAT 1727037 |||| || ||| |||||||| || || || ||||| ||||| || | ||||||||||| Sbjct 1079528 GTCGTTGATCAGACCCTTCCAGCCAACTGTTGTGCGGGGCTTCTCCAGGTAGGCGCGCAT 1079469 Query 1727038 GACCACGCAAAG 1727049 || ||||| || Sbjct 1079468 GATGACGCAGAG 1079457 Score = 113 bits (124), Expect = 6e-19 Identities = 177/251 (71%), Gaps = 3/251 (1%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || ||||||||| ||||| ||| | |||| | | ||| Sbjct 1794269 GAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGAGCCTCGGGAATCTGG 1794328 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| |||| || || ||||||| ||| ||||| |||||| ||| ||||| Sbjct 1794329 ACCTCTCCGCTGAAACGCTCGACCAGGTTTTCGTTGACGATACCGTCGGAGGCAGCGAAG 1794388 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTGG 869809 || || |||||||| ||| |||| ||||| || ||| ||| ||| ||||| | Sbjct 1794389 AAGGCAAGGACGTGGGAGATGAAGTAACGCTCATCATCGTTGAGGCGGTTGTGCCAGTCG 1794448 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 | || | || || | |||||| |||||||||| |||||||||||||| ||| Sbjct 1794449 TGGAGATCCTTGGATAGATCAATCTCCTCAGCGGTCCAGAAAGAGGCCTCGGCCTTCTTG 1794508 Query 869870 TACATCTCCCA 869880 ||||| | ||| Sbjct 1794509 TACATTTGCCA 1794519 Score = 95.1 bits (104), Expect = 1e-13 Identities = 139/195 (71%), Gaps = 9/195 (5%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| ||| || | ||||||| |||| ||| |||||||| || || ||||| Sbjct 1793933 ACCCTCGTCACGAGAAATGAGTTCGTTGGAGAAGGTGAGACCGGGCATCAGACCACGCTT 1793992 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| ||||||| | ||| || ||||| ||||| |||||||| || || || Sbjct 1793993 CTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAAGATACCCTCGACAGCAGCGAA 1794052 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTG---TTGATCCACTTCATCGC 869355 | | | || ||| || ||| ||||| ||| || |||||||| || || Sbjct 1794053 GGCAACCAGACGCGAAGCGAAG--GTCGA----CTCAGTGTCATTGATCCAACGGATGGC 1794106 Query 869356 CCAGTCGGCCTTTTT 869370 ||| |||||||| || Sbjct 1794107 CCACTCGGCCTTCTT 1794121 >seq10 Length=3304607 Score = 145 bits (160), Expect = 9e-29 Identities = 101/115 (88%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || ||||||||||||||||||||| | || ||||| |||| |||||| | || |||||| Sbjct 783137 GCTGCCAACTACCTCGACATCAAGGCCCTCCTCGACGTTGGCTGCAAGACCGTCGCCAAC 783078 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||||||| ||||||||||||||||||||||| |||||| || ||| Sbjct 783077 ATGATCAAGGGCAAGTCCCCCGAGGAGATCCGCAAGACCTTCAACATCCAGAACG 783023 Score = 104 bits (114), Expect = 3e-16 Identities = 203/300 (68%), Gaps = 0/300 (0%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| |||||||| || |||| || || || |||||||| || || | || ||||| Sbjct 1364687 CTGGTCAACGTAGCGGGCAGTGTTATTGAACACACGGAGCATAGGAACAATACCATTGGA 1364746 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 ||| ||||| || | | ||||| |||| ||| || | ||| | || || Sbjct 1364747 GGAGCCATTGGTTCCACCAATGTAGGAACCGGTGGCACGGATGCGGTGAACATTCAAACC 1364806 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||||| || || | |||||| || | || || || || ||||||||||| ||||| Sbjct 1364807 AATGCCACCAGCGGTCTTGGAAATCATAGCACAGGTCTTAAGAGTGTCGTAGATACCCTC 1364866 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || ||| || |||||| || || ||||| || | || || || | ||| | Sbjct 1364867 AATGCTGTCTGCGGACATGTCGACCAGGAAGCAAGAAGCAAGCTGGGGCTGGGGAGTGGC 1364926 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 |||||||||||| ||||| | || |||||| ||| | ||||| || |||||| Sbjct 1364927 GGCGTTGAAGAGAGTGGGGGAGGCGTGGGTGAAGTACTTTTGGGACATCAAGTGGTAGGT 1364986 Score = 86.0 bits (94), Expect = 8e-11 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 1628448 CATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTT 1628507 ||| || || ||| ||||| || ||||| ||||| || || || || || ||||| Sbjct 1364534 CATGAACAGATCAGGAGTCCAGAGAGCGTAGAAGAGATCCCGGGCACGAACTTCTTCCTT 1364593 Query 1628508 GCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTA 1628567 ||||||||||| ||| ||||| | |||| | || |||||||| ||||||||||| Sbjct 1364594 ACCGTGGTTCTTACGGAGATCGAGGAACTCGAAGACATCTGCGTGCCAGGGCTCCAGGTA 1364653 Query 1628568 GCAGGCAAAGGCGCCCTTGCGCTTG 1628592 | |||||| || || ||||||| Sbjct 1364654 GATGGCAAACGCACCAGGGCGCTTG 1364678 >seq27 Length=4901019 Score = 131 bits (144), Expect = 2e-24 Identities = 124/157 (79%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 |||||||| ||||| || || || || ||| ||||||||||| | ||||| |||||| Sbjct 2945562 GACAGCATTGGCGGAACAGTAACATGTGTGATCCGCAACGTGCCCGTCGGCCTAGGCGAG 2945503 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| | || ||| |||||||||||||||||| ||||| |||||| Sbjct 2945502 CCCTGCTTCGACAAGCTGGAAGCCAAGCTCGCCCACGCCATGCTCAGCATCCCCGCCACC 2945443 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202 ||||| |||||||| ||| ||| || |||| |||| Sbjct 2945442 AAGGGCTTCGAGATCGGCTCCGGCTTCGGCGGCTGCG 2945406 Score = 89.7 bits (98), Expect = 6e-12 Identities = 213/320 (67%), Gaps = 8/320 (3%) Strand=Plus/Minus Query 18099 TGGCGAGTCGCACGGGGCGGGC-GTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGC 18157 ||||||||| ||| | || | |||||||| || |||| || || || ||||| Sbjct 2946241 TGGCGAGTCTCACTGC-CGCTCTGTCGGCTGTATTGTCGATGGATGCCCTCCTGGCATGG 2946183 Query 18158 CACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCAC 18217 || ||||||||||||||||||| ||| || || || || || || ||| |||| | Sbjct 2946182 AGCTCACCGAGGCCGACATCCAGCCCCAGATGACCCGCCGTCGTCCCGGTCAGAGCGCCC 2946123 Query 18218 TTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCC 18277 | | || ||||| ||||| || || ||| |||||||| ||||| ||| ||| Sbjct 2946122 TCACTACCCCGCGGGACGAGAAGGACCGAGTCGAGATCCAGTCTGGCACAGAGTTCGGAG 2946063 Query 18278 TCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACT 18337 |||| || ||| | || | ||| | | || ||| |||||||| ||| |||| Sbjct 2946062 TCACTCTAGGCACACCAATTGGCATGATGGTCCGCAATGAGGACCAGCGCCCCAAGGACT 2946003 Query 18338 ATTCCGAC------ATGTGCAAGGTGCCGCGGCCCTCACACGCCGACTACACCTACATGG 18391 | || | ||| | | | || || ||| || ||||||| ||||||| | | Sbjct 2946002 ACGGCGGCAGCACAATGGACTTGTTCCCCCGCCCCAGCCATGCCGACTTCACCTACCTCG 2945943 Query 18392 CCAAGTACGGCATCAAGGCG 18411 |||||||| | |||||| Sbjct 2945942 AGAAGTACGGTGTTAAGGCG 2945923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107134111989654