Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03-
04] 62 sequences; 34,340,580 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq10 138 1e-27
seq36 102 7e-17
>seq10
Length=3304607
Score = 138 bits (152), Expect = 1e-27
Identities = 468/718 (65%), Gaps = 21/718 (3%)
Strand=Plus/Plus
Query 139302 CTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATC-GCGAC 139360
||||||||| |||||||| | ||||| ||||||||| | |||| ||| | | | |
Sbjct 1364426 CTCGTACTTCTCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCGAGACCAGAGGC 1364485
Query 139361 ACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGAT 139420
|| || || || | ||| | ||| | ||||| |||| || ||| ||||||||||||
Sbjct 1364486 -CTCGTTGGGGCAGAAGAGAGTCCAGTCACCGTTAGCCTCAACACGCTTCATGAACAGAT 1364544
Query 139421 CCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTAC 139480
| ||| |||| | |||| | | | ||| || || |||||| ||| |||
Sbjct 1364545 CAGGAGTCCAGAGAGCGTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACCGTGGTTC- 1364603
Query 139481 GTTTC--ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCAT 139538
|| | | | ||||| || || || || |||||||| || ||||| |||||||| |
Sbjct 1364604 -TTACGGAGATCGAGGAACTCGAAGACATCTGCGTGCCAGGGCTCCAGGTAGATGGCAAA 1364662
Query 139539 TGCGCCTTTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCG 139595
|| || || ||| ||||| || || |||| || ||| |||||||| || ||
Sbjct 1364663 CGCACCAGGGCGCTTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTATTGAACACACG 1364722
Query 139596 CAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG---GGACTGTTGCG 139652
| ||| || | | ||| | | | || ||||| | || ||| | || | ||
Sbjct 1364723 GAGCATAGGAACAATACCATTGGAGGAGCCATTGGTTCCACCAATGTAGGAACCGGTG-- 1364780
Query 139653 AGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCA 139712
|| |||| | || ||||| | || || || || | ||||| || | | | ||
Sbjct 1364781 -GCACGGATGCGGTGAACATTCAAACCAATGCCACCAGCGGTCTTGGAAATCATAGCACA 1364839
Query 139713 ATCGCGTAAT-GTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGC 139771
| ||| || ||||| ||||| |||||||| | ||| |||||| ||||
Sbjct 1364840 GGT-CTTAAGAGTGTCGTAGATACCCTCAATGCTGTCTGCGGACATGTCGACCAGGAAGC 1364898
Query 139772 ATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGA 139831
| || | ||| || || | ||| |||| || ||||| || ||||| ||||
Sbjct 1364899 AAGAAGCAAGCTGGGGCTGGGGAGTGGCGGCGTTGAAGAGAGTGGGGGAGGCGTGGGTGA 1364958
Query 139832 ACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGA 139891
| | || |||||||| | ||| || || ||||| || | || ||| |||||||
Sbjct 1364959 AGTACTTTTGGGACATCAAGTGGTAGGTCTCAATGGCCTTCTCGATGTCCTCGCCGTGGA 1365018
Query 139892 TACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAttt 139951
||||||||| || |||||||||| || ||| || ||||| || ||| | |||
Sbjct 1365019 TACCGACAGCAACGCGCATCAGCAGGTGCTGGGGACGCTCGGCAACACTGCCGTTGATAC 1365078
Query 139952 ttttCAGATA--ACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATCG 140007
||||| | || ||| ||||||||| | || ||| | | |||||||| |||
Sbjct 1365079 GGAGAAGATATGAACG--CTCCAGGGTCTTGAAACCGAAGAAGTTGTAGTTGAAGTCG 1365134
>seq36
Length=2049559
Score = 102 bits (112), Expect = 7e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | || || || ||||| || || || || || || ||||| | |
Sbjct 284425 ATGCAAATTTTCGTGAAGACCCTCACCGGAAAGACCATCACTCTGGAGGTAGAGTCGTCG 284484
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || ||||||||| || || ||||| || || || || ||
Sbjct 284485 GATACCATCGATAACGTCAAGTCAAAGATCCAGGATAAGGAAGGCATCCCCCCTGACCAG 284544
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|||||| | ||||||||||| || ||||| |||||| | | | |||| || || |||
Sbjct 284545 CAACGTCTTATCTTTGCCGGTAAGCAGCTTGAGGATGGCCGCACCCTGTCCGACTACAAC 284604
Query 24884 ATTCAAAAGGAATCGACACTACAC 24907
|| ||||||||||| || || |||
Sbjct 284605 ATCCAAAAGGAATCCACTCTGCAC 284628
Score = 98.7 bits (108), Expect = 9e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || ||| | || || || || || || || || ||||| ||||| ||| | |
Sbjct 284653 ATGCAAATTTTTGTCAAGACACTCACTGGCAAGACCATCACGCTGGAAGTGGAATCATCT 284712
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| ||| | || |||||| ||||| || || || || || || ||
Sbjct 284713 GACACGATCGACAACGTTAAGAGCAA-GATCCAGGACAAGGAGGGTATCCCCCCAGACCA 284771
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| ||| | ||||| ||||| || ||||||||||| | | | | | || || || ||
Sbjct 284772 GCAGCGTCTTATCTTCGCCGGTAAGCAGCTGGAGGACGGGCGCACCCTTTCTGACTACAA 284831
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| || || ||||||||| | || |||| || ||
Sbjct 284832 TATCCAGAAGGAGAGTACCCTGCACTTGGTGCTCCGTCTGCGTGGTGG 284879
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897251329360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |