Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq10 138 1e-27 seq36 102 7e-17 >seq10 Length=3304607 Score = 138 bits (152), Expect = 1e-27 Identities = 468/718 (65%), Gaps = 21/718 (3%) Strand=Plus/Plus Query 139302 CTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATC-GCGAC 139360 ||||||||| |||||||| | ||||| ||||||||| | |||| ||| | | | | Sbjct 1364426 CTCGTACTTCTCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCGAGACCAGAGGC 1364485 Query 139361 ACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGAT 139420 || || || || | ||| | ||| | ||||| |||| || ||| |||||||||||| Sbjct 1364486 -CTCGTTGGGGCAGAAGAGAGTCCAGTCACCGTTAGCCTCAACACGCTTCATGAACAGAT 1364544 Query 139421 CCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTAC 139480 | ||| |||| | |||| | | | ||| || || |||||| ||| ||| Sbjct 1364545 CAGGAGTCCAGAGAGCGTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACCGTGGTTC- 1364603 Query 139481 GTTTC--ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCAT 139538 || | | | ||||| || || || || |||||||| || ||||| |||||||| | Sbjct 1364604 -TTACGGAGATCGAGGAACTCGAAGACATCTGCGTGCCAGGGCTCCAGGTAGATGGCAAA 1364662 Query 139539 TGCGCCTTTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCG 139595 || || || ||| ||||| || || |||| || ||| |||||||| || || Sbjct 1364663 CGCACCAGGGCGCTTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTATTGAACACACG 1364722 Query 139596 CAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG---GGACTGTTGCG 139652 | ||| || | | ||| | | | || ||||| | || ||| | || | || Sbjct 1364723 GAGCATAGGAACAATACCATTGGAGGAGCCATTGGTTCCACCAATGTAGGAACCGGTG-- 1364780 Query 139653 AGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCA 139712 || |||| | || ||||| | || || || || | ||||| || | | | || Sbjct 1364781 -GCACGGATGCGGTGAACATTCAAACCAATGCCACCAGCGGTCTTGGAAATCATAGCACA 1364839 Query 139713 ATCGCGTAAT-GTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGC 139771 | ||| || ||||| ||||| |||||||| | ||| |||||| |||| Sbjct 1364840 GGT-CTTAAGAGTGTCGTAGATACCCTCAATGCTGTCTGCGGACATGTCGACCAGGAAGC 1364898 Query 139772 ATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGA 139831 | || | ||| || || | ||| |||| || ||||| || ||||| |||| Sbjct 1364899 AAGAAGCAAGCTGGGGCTGGGGAGTGGCGGCGTTGAAGAGAGTGGGGGAGGCGTGGGTGA 1364958 Query 139832 ACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGA 139891 | | || |||||||| | ||| || || ||||| || | || ||| ||||||| Sbjct 1364959 AGTACTTTTGGGACATCAAGTGGTAGGTCTCAATGGCCTTCTCGATGTCCTCGCCGTGGA 1365018 Query 139892 TACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAttt 139951 ||||||||| || |||||||||| || ||| || ||||| || ||| | ||| Sbjct 1365019 TACCGACAGCAACGCGCATCAGCAGGTGCTGGGGACGCTCGGCAACACTGCCGTTGATAC 1365078 Query 139952 ttttCAGATA--ACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATCG 140007 ||||| | || ||| ||||||||| | || ||| | | |||||||| ||| Sbjct 1365079 GGAGAAGATATGAACG--CTCCAGGGTCTTGAAACCGAAGAAGTTGTAGTTGAAGTCG 1365134 >seq36 Length=2049559 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || || || ||||| || || || || || || ||||| | | Sbjct 284425 ATGCAAATTTTCGTGAAGACCCTCACCGGAAAGACCATCACTCTGGAGGTAGAGTCGTCG 284484 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||||||| || || ||||| || || || || || Sbjct 284485 GATACCATCGATAACGTCAAGTCAAAGATCCAGGATAAGGAAGGCATCCCCCCTGACCAG 284544 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | ||||||||||| || ||||| |||||| | | | |||| || || ||| Sbjct 284545 CAACGTCTTATCTTTGCCGGTAAGCAGCTTGAGGATGGCCGCACCCTGTCCGACTACAAC 284604 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 || ||||||||||| || || ||| Sbjct 284605 ATCCAAAAGGAATCCACTCTGCAC 284628 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | || || || || || || || || ||||| ||||| ||| | | Sbjct 284653 ATGCAAATTTTTGTCAAGACACTCACTGGCAAGACCATCACGCTGGAAGTGGAATCATCT 284712 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| ||| | || |||||| ||||| || || || || || || || Sbjct 284713 GACACGATCGACAACGTTAAGAGCAA-GATCCAGGACAAGGAGGGTATCCCCCCAGACCA 284771 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| | ||||| ||||| || ||||||||||| | | | | | || || || || Sbjct 284772 GCAGCGTCTTATCTTCGCCGGTAAGCAGCTGGAGGACGGGCGCACCCTTTCTGACTACAA 284831 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || || ||||||||| | || |||| || || Sbjct 284832 TATCCAGAAGGAGAGTACCCTGCACTTGGTGCTCCGTCTGCGTGGTGG 284879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897251329360