Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq10 145 1e-28 seq54 140 5e-27 seq56 109 9e-18 >seq10 Length=3304607 Score = 145 bits (160), Expect = 1e-28 Identities = 101/115 (88%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || ||||||||||||||||||||| |||||||||| | || ||||||||||| |||||| Sbjct 783137 GCTGCCAACTACCTCGACATCAAGGCCCTCCTCGACGTTGGCTGCAAGACCGTCGCCAAC 783078 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | |||||||||||||| |||||||| |||||||||||||| |||||| || ||| Sbjct 783077 ATGATCAAGGGCAAGTCCCCCGAGGAGATCCGCAAGACCTTCAACATCCAGAACG 783023 Score = 104 bits (114), Expect = 4e-16 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 2071810 GCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGG 2071869 |||||| ||||| ||||| | |||||| ||| || | | || || ||| ||||| Sbjct 1364484 GCCTCGTTGGGGCAGAAGAGAGTCCAGTCACCGTTAGCCTCAACACGCTTCATGAACAGA 1364543 Query 2071870 TCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTC 2071929 || ||||| || |||| |||||||| || || || || ||||| ||||||||| Sbjct 1364544 TCAGGAGTCCAGAGAGCGTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACCGTGGTTC 1364603 Query 2071930 TTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAG 2071989 || || ||||| | |||| || || |||||||| |||||||||||| |||||| Sbjct 1364604 TTACGGAGATCGAGGAACTCGAAGACATCTGCGTGCCAGGGCTCCAGGTAGATGGCAAAC 1364663 Query 2071990 GCGCCCTTGCGCTTG 2072004 || || ||||||| Sbjct 1364664 GCACCAGGGCGCTTG 1364678 >seq54 Length=3157102 Score = 140 bits (154), Expect = 5e-27 Identities = 183/251 (73%), Gaps = 2/251 (1%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| ||| || || || ||| |||||| |||||||||||||| | | Sbjct 1793611 TGACACCAGCCTTCTGATAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCA 1793670 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 | ||||| ||||||| | ||| |||||||| | ||||| ||||| | || | Sbjct 1793671 GGGAGATGGACTCCATGAAGTCGAAGGGGTTGGCAGAGTTGTAGTACTTCTTGTTGCCAA 1793730 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | | | || || ||||| ||||| || || ||||||||||||||||| |||||||| Sbjct 1793731 GGGCCACGAGGAGACGGTCAGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTTCA 1793790 Query 794071 TGCCGATGAGCGCCAC-GGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCC 794129 |||| | || ||||| ||| || | || ||| ||||| | |||||| | |||||| Sbjct 1793791 TGCCAAGCAG-GCCACAGGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATACCAACGGCC 1793849 Query 794130 TCGATGATGAT 794140 |||| ||||| Sbjct 1793850 TCGACAATGAT 1793860 >seq56 Length=4166353 Score = 109 bits (120), Expect = 9e-18 Identities = 86/103 (83%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||| ||||||||||||||||| |||||||||||| |||| || || ||| | | Sbjct 2712557 GTACTTGGTAACGGCCTTGGTACCCTCAGAGACGGCGTGCTTGGCAAGCTCACCGGGGAG 2712498 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTG 1485573 ||| ||||| |||| |||||||||||| |||| | ||| ||| Sbjct 2712497 GATGAGGCGTACGGAGGTCTGGATCTCCCGGGAGGAGATGGTG 2712455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916239804777218