Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03-
04] 62 sequences; 34,340,580 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq36 102 2e-16
>seq36
Length=2049559
Score = 102 bits (112), Expect = 2e-16
Identities = 139/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || ||||| ||||| || |||||| | ||||| || ||| ||||| ||||
Sbjct 284212 AAGACCCTCACCGGAAAGACCATCACTCTTGAAGTTGAGTCTTCCGACACCATCGACAAC 284271
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| |||||||| || || || || || || ||| || | || ||||||
Sbjct 284272 GTCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCTCCCGACCAGCAGCGTCTCATCTTC 284331
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|||||||||||| | || ||||| | ||| | |||| |||||| ||||||| |||||
Sbjct 284332 GCCGGAAAGCAGCTTGAGGATGGTCGCACTCTCTCCGACTACAACATCCAGAAGGAGTCC 284391
Query 206365 ACTCTTCACCTTGT 206378
||||| || || ||
Sbjct 284392 ACTCTCCATCTCGT 284405
Score = 84.2 bits (92), Expect = 5e-11
Identities = 137/196 (70%), Gaps = 1/196 (1%)
Strand=Plus/Plus
Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237
||||| ||| || ||||| || || || ||||| ||||||||||| |||||||| |
Sbjct 284661 TTTTGTCAAGACACTCACTGGCAAGACCATCACGCTGGAAGTGGAATCATCTGACACGAT 284720
Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297
||| || ||| ||||| || || || || || || || ||| || | ||
Sbjct 284721 CGACAACGTTAAGAGCAAGATCCAGGACAAGGAGGGTATCCCCCCAGACCAGCAGCGTCT 284780
Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357
|||||||||||| |||||| |||| || || | || | | || ||||| |||||||
Sbjct 284781 TATCTTCGCCGGTAAGCAGCTGGAGGACGGGCGCACCCTTTCTGACTACAATATCCAGAA 284840
Query 206358 AGAGTCTACTCTTCAC 206373
||| ||| || |||
Sbjct 284841 GGAGAGTACCCTGCAC 284856
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181819861191102
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |