Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03-
04] 62 sequences; 34,340,580 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq54 86.0 6e-12
seq36 84.2 2e-11
>seq54
Length=3157102
Score = 86.0 bits (94), Expect = 6e-12
Identities = 160/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 47046 GAGGCGGTGAGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCC-GTCGCCTTGCTGGG 47104
||||| || | ||||| ||||||| | |||| || || ||| || |||| ||| ||
Sbjct 1793851 GAGGCCGTTGGTATCGAGCAGGAGTTCCTCACTGACGCTCTTCCCTGTGGCCT-GCTTGG 1793793
Query 47105 CATGAACGCACAGTCTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCA 47164
||||||||| || |||||| | || || |||||||| || || ||||| | |||
Sbjct 1793792 CATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTTGTCGCTGACCGTCTCCTCGTGGC 1793733
Query 47165 GCTCGGACAAC-CGAAATATTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTT 47223
|| || |||| ||| || | || || || || || || || ||| | ||| |
Sbjct 1793732 CCTTGG-CAACAAGAAGTACTACAACTCTGCCAACCCCTTCGACTTCATGGAGTCCATCT 1793674
Query 47224 CGCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAGTCGGAGAGTATAAG 47273
| || | ||||| ||||| || |||||||| || ||||| || ||| ||
Sbjct 1793673 CCCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTATCAG 1793624
>seq36
Length=2049559
Score = 84.2 bits (92), Expect = 2e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || ||||||||||||||||||| |||||| ||| || ||||| || || |
Sbjct 284162 GACTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGCTGCTTGCCTGCG 284103
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030
| || || ||||| || || ||||| |||||||| |||||
Sbjct 284102 AAAATCAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATC 284062
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|| || ||||| |||||||||||| || ||| || ||| || ||||| ||||||| |
Sbjct 284618 GATTCCTTTTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCA 284559
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| ||||| || || || || || |||||||| ||||| || ||| || |
Sbjct 284558 AAGATAAGACGTTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGGATCTTTGACTTGACG 284499
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | ||||| | || ||| || || | || | || || || || || || ||
Sbjct 284498 TTATCGATGGTATCCGACGACTCTACCTCCAGAGTGATGGTCTTTCCGGTGAGGGTCTTC 284439
Query 132110 ATGAAAATCTGCAT 132123
| |||||| |||||
Sbjct 284438 ACGAAAATTTGCAT 284425
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476610830626320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |