Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq36 131 2e-25 seq27 109 6e-19 seq10 104 2e-17 seq54 86.0 6e-12 >seq36 Length=2049559 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || |||||||||||||| |||||||||||| Sbjct 284651 CCACCACGGAGACGGAGGACAAGGTGCAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 284592 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| || || ||||| || | ||| ||||| || || || Sbjct 284591 AGGGTGCGGCCATCCTCAAGCTGCTTACCGGCAAAGATAAGACGTTGCTGGTCAGGGGGG 284532 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || || || ||| ||||| || | || || ||||| || || Sbjct 284531 ATGCCTTCCTTATCCTGGATCTTTGACTTGACGTTATCGATGGTATCCGACGACTCTACC 284472 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| ||||| || ||||| | || || |||||||||||||| Sbjct 284471 TCCAGAGTGATGGTCTTTCCGGTGAGGGTCTTCACGAAAATTTGCAT 284425 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || ||||| ||||| |||||||||||||||| Sbjct 284195 CCACCACGGAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTC 284136 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||| |||||||| ||||||| |||||||| || || || Sbjct 284135 AGGGTACGGCCATCCTCAAGCTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCAGGAGGA 284076 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || ||||| || ||||| ||| | |||||||| || || || Sbjct 284075 ATGCCTTCCTTATCCTGAATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACC 284016 Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689 || ||||| ||||| || ||||| Sbjct 284015 TCAAGAGTGATGGTCTTGCCGGT 283993 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||||| || || ||||| ||||| || |||||||||||| Sbjct 284423 CCACCACGGAGGCGGAGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 284364 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || || || ||||| || || || || || | ||||||||| ||||| || Sbjct 284363 AGAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGG 284304 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || ||||| || ||||| ||| | |||||||| || || || Sbjct 284303 ATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCAACT 284244 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| ||||| || ||||| | || || ||||| |||||||| Sbjct 284243 TCAAGAGTGATGGTCTTTCCGGTGAGGGTCTTTACGAAGATTTGCAT 284197 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 134523 TCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAA 134582 ||||| || || |||||||| || |||| | ||| || ||||| || || || || Sbjct 284843 TCCTTCTGGATATTGTAGTCAGAAAGGGTGCGCCCGTCCTCCAGCTGCTTACCGGCGAAG 284784 Query 134583 ATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCG 134642 || | ||||||||| || || || || || || || || || || || || || | Sbjct 284783 ATAAGACGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGGATCTTGCTCTTAACGTTG 284724 Query 134643 TCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACG 134702 || | ||||| || |||||||| || || || ||||| || || || | || || || Sbjct 284723 TCGATCGTGTCAGATGATTCCACTTCCAGCGTGATGGTCTTGCCAGTGAGTGTCTTGACA 284664 Query 134703 AAAATTTGCAT 134713 ||||||||||| Sbjct 284663 AAAATTTGCAT 284653 >seq27 Length=4901019 Score = 109 bits (120), Expect = 6e-19 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 134521 ATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAA 134580 || |||| || ||||||||||||| | |||| | || |||||||| ||||| || | Sbjct 3950616 ATACCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGA 3950675 Query 134581 AAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCG 134640 | |||| |||||||| || || || ||||| || || || || || || ||||| Sbjct 3950676 AGATCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGT 3950735 Query 134641 CGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAA 134700 ||| | |||||| ||| || |||||||| |||||||| ||||| || | || || | Sbjct 3950736 TGTCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGA 3950795 Query 134701 CGAAA 134705 ||||| Sbjct 3950796 CGAAA 3950800 >seq10 Length=3304607 Score = 104 bits (114), Expect = 2e-17 Identities = 529/838 (63%), Gaps = 13/838 (2%) Strand=Plus/Minus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 || ||| ||||| ||||||| || || || || |||||||| ||||| || ||| | Sbjct 1365049 CAGCACCTGCTGATGCGCGTTGCTGTCGGTATCCACGGCGAGGACATCGAGAAGGCCATT 1364990 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683 || || ||||| ||||||| || | || || ||||| || ||||| | || | Sbjct 1364989 GAGACCTACCACTTGATGTCCCAAAAGTACTTCACCCACGCCTCCCCCACTCTCTTCAAC 1364930 Query 7684 GCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGC 7743 || | ||| | ||| || | | || || || || | |||| || ||||||| Sbjct 1364929 GCCGCCACTCCCCAGCCCCAGCTTGCTTCTTGCTTCCTGGTCGACATGTCCGCAGACAGC 1364870 Query 7744 ATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGGA 7803 || || || || ||| |||| || || || | |||||||| || || || Sbjct 1364869 ATTGAGGGTATCTACGACACTCTTAAGACCTGTGCTATGATTTCCAAGACCGCTGGTGGC 1364810 Query 7804 ATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGA 7863 || ||| |||| || || | | || |||| |||| | ||| | ||||| || Sbjct 1364809 ATTGGTTTGAATGTTCACCGCATCCGTGCCACCGGTTCCTACATTGGTGGAACCAATGGC 1364750 Query 7864 AAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGAC 7923 ||| ||| | | || ||| | || |||||||||||| | | || | || ||| Sbjct 1364749 TCCTCCAATGGTATTGTTCCTATGCTCCGTGTGTTCAATAACACTGCCCGCTACGTTGAC 1364690 Query 7924 CAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGAC 7980 ||||| || |||||| || || ||||||||| ||||||| |||||||| || Sbjct 1364689 CAGGGTGGTAACAAGCGCCCTGGTGCGTTTGCCATCTACCTGGAGCCCTGGCACGCAGAT 1364630 Query 7981 ATTTACGCAGTGCTAAATCTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCGCGAT 8040 | | || | || |||| ||| ||| ||| ||||| || || ||| Sbjct 1364629 GTCTTCGAGTTCCTCGATCTCCGTAAGAACCACGGTAAGGAAGAAGTTCGTGCCCGGGAT 1364570 Query 8041 CTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCACAA 8100 || |||| || | ||| || |||||||| |||| ||| ||| | ||| | Sbjct 1364569 CTCTTCTACGCTCTCTGGACTCCTGATCTGTTCATGAAGCGTGTTGAGGCTAACGGTGAC 1364510 Query 8101 TGGTCGCTCATGTGCCCCGATCGTTGCC-CTTTATTAAAAAACGTTTACGGTTCAAAATT 8159 ||| | ||| | |||||| | || ||| || | | || |||||| | || Sbjct 1364509 TGGACTCTCTTCTGCCCC-AACGAGGCCTCTGGTCTCGCTGATGTCTACGGTGATGAGTT 1364451 Query 8160 TGAACAATTGTACAAACAATACGAACACGACGGCGCGTACGTGCGGCAAG----TGAAAG 8215 || | ||| | | ||||| | || ||| ||| || ||||| | || | Sbjct 1364450 CGAGGCTCTCTACGAGAAGTACGAGAAGGAGGGC-CGT---GGCCGCAAGACCATTAAGG 1364395 Query 8216 CGCGCGACCTGCACCGCGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGC 8275 | | | || |||||| | || || | || || |||| || | ||||| Sbjct 1364394 CTCAGAAGCTCTGGTATGCCATTCTTGAGGCCCAGACTGAGACTGGTAACCCCTTCATGC 1364335 Query 8276 TGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCA 8335 ||||||| || ||||||||| || ||||| || | ||| |||| || ||| | || Sbjct 1364334 TGTACAAGGATGCTTGCAACAAGAAGAGCAACCAGAAGAACCTGGGAACTATTCGCAGCT 1364275 Query 8336 GCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAA 8393 ||| |||||| |||| || | ||||||| || || || || || || |||||||| Sbjct 1364274 CCAACCTGTGCACTGAGATCATCGAGTACAGTGCTCCTGATGAGGTCGCTGTTTGCAA 1364217 >seq54 Length=3157102 Score = 86.0 bits (94), Expect = 6e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 21717 GAGACAAGCAAAATTGGTGTGCAATCCCTCGTCGCGCGAAATCAATTCGTTGCTGAACGT 21776 ||||||||| |||| ||||| | |||||||| || ||||| | ||||||| ||| || Sbjct 1793909 GAGACAAGCGAAATCAGTGTGGAGACCCTCGTCACGAGAAATGAGTTCGTTGGAGAAGGT 1793968 Query 21777 GAGACCGGGCATTAAACCTCGATTTTTAATGTAAAAAATTGCCGCAAAGCTACCGGaaaa 21836 |||||||||||| | ||| || || || | | || || | || ||| ||| || || Sbjct 1793969 GAGACCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAA 1794028 Query 21837 aaaCACGCCCTCCACAATGGCGAACGCCACCA 21868 || | ||||| ||| ||||| || |||| Sbjct 1794029 GAAGATACCCTCGACAGCAGCGAAGGCAACCA 1794060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398008316240