Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq10 145 1e-29 seq54 102 1e-16 >seq10 Length=3304607 Score = 145 bits (160), Expect = 1e-29 Identities = 679/1067 (64%), Gaps = 16/1067 (1%) Strand=Plus/Plus Query 69352 ATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAAC 69411 ||||| ||||| || | ||| || ||||| ||||| || || |||||||| || || || Sbjct 1364283 ATAGTTCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTACAGCATGAAG 1364342 Query 69412 GGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATT 69471 || ||||||| ||| |||| | || | ||| | | ||| | | ||| || || Sbjct 1364343 GGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCATACCAGAGCTTCTGAGCCTTAAT- 1364401 Query 69472 ACGGTCTTGTA---ACGCTTCTCTTTTTCATA-TTGT-GTATATAGCCGTTCGAATTCAT 69526 ||||||| ||| ||| || || || || | ||| | |||| ||||| |||| Sbjct 1364402 --GGTCTTGCGGCCACGGCCCTCCTTCTCGTACTTCTCGTAGAGAGCC--TCGAACTCAT 1364457 Query 69527 CTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCAT 69586 | || | |||||| | | |||| || || || || | | | ||| || | | Sbjct 1364458 CACCGTAGACATCAGCGAGACCAGAGGCCTCGTTGGGGCAGAAGAGAGTCCAGTCACCGT 1364517 Query 69587 CATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGG 69646 | ||| ||| || ||||| || ||||| ||| |||| ||||| |||||||| | || Sbjct 1364518 TAGCCTCAACACGCTTCATGAACAGATCAGGAGTCCAGAGAGCGTAGAAGAGATCCCGGG 1364577 Query 69647 TTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAAT 69706 | | |||||| || || || || |||||||| ||||| | | ||| | | Sbjct 1364578 CACGAACTTCTTCCTTACCGTGGTTCTTACGGAGATCGAGGAACTCGAAGACATCTGCGT 1364637 Query 69707 GCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGT 69766 |||| || || || || || || | | || || || || || || ||||| || | || Sbjct 1364638 GCCAGGGCTCCAGGTAGATGGCAAACGCACCAGGGCGCTTGTTACCACCCTGGTCAACGT 1364697 Query 69767 ATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTG 69826 | | |||||||||||| | || | ||||| |||| ||||||||| || ||||| | Sbjct 1364698 AGCGGGCAGTGTTATTGAACACACGGAGCATAGGAACAATACCATTGGAGGAGCCATTGG 1364757 Query 69827 TTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTG 69886 ||||| ||| || || | || || || || | | ||| || || || | Sbjct 1364758 TTCCACCAATGTAGGAACCGGTGGCACGGATGCGGTGAACATTCAAACCAATGCCACCAG 1364817 Query 69887 CCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCAT 69946 | | || || || | |||||| || | ||||| || |||||||| ||||| || Sbjct 1364818 CGGTCTTGGAAATCATAGCACAGGTCTTAAGAGTGTCGTAGATACCCTCAATGCTGTCTG 1364877 Query 69947 CTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATA 70006 | ||||| | || || || || | || | || ||| | || || || | Sbjct 1364878 CGGACATGTCGACCAGGAAGCAAGAAGCAAGCTGGGGCTGGGGAGTGGCGGCGTTGAAGA 1364937 Query 70007 ATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTG 70066 || || || ||||| ||||| | |||| || | || | ||| || ||||| || Sbjct 1364938 GAGTGGGGGAGGCGTGGGTGAAGTACTTTTGGGACATCAAGTGGTAGGTCTCAATGGCCT 1364997 Query 70067 ATTCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGT 70125 || || ||| | | | || || || | || || ||||||| || ||||| || || Sbjct 1364998 TCTCGATGTCCTCGCCG-TGGATACCGACAGCAACGCGCATCAGCAGGTGCTGGGGACGC 1365056 Query 70126 TCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAA 70185 || | | || || | || ||||| ||||| || || || || || Sbjct 1365057 TCGGCAACACTGCCGTTGATACGGAGAAGATATGAACGCTCCAGGGTCTTGAAACCGAAG 1365116 Query 70186 TAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTG 70245 ||||||| ||||| | ||||| | ||| | || || || | ||| | ||| Sbjct 1365117 AAGTTGTAGTTGAAGTCGCGGTCGTAGACAATGGCCGAGTTAAGCTCATCGGCGTGTTTC 1365176 Query 70246 GTAACTATATCCATA--ACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGAT 70303 |||| || | |||| | || | ||||| || |||| | ||| ||||| || | Sbjct 1365177 ATAACAATCT-CATAGTGCTGT-TGAGAGATCATAGGAGCAGGCTTATTGTTTTTGGGGT 1365234 Query 70304 TAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTA 70363 ||||||||| | | | || || || ||| | |||||||| | |||||| | Sbjct 1365235 TAACATAGTGGTAGAGGTCAGAGATGACCATGGAGAATTGCTTTTTTGTCTGCTTGTGGA 1365294 Query 70364 AATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGT 70410 || || | ||| || | ||| || || || || ||||| || ||| Sbjct 1365295 GGTTGGAAACGGCAATACGGGCAGCCAGGATGGCGTAGTCCGGGTGT 1365341 >seq54 Length=3157102 Score = 102 bits (112), Expect = 1e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676 || ||||| ||| || || ||||| || | | ||| | |||||| || || ||||| Sbjct 1793913 CAAGCGAAATCAGTGTGGAGACCCTCGTCACGAGAAATGAGTTCGTTGGAGAAGGTGAGA 1793972 Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAG 39736 || ||||| ||||||||||| |||||||| || |||| || || || ||||| |||||| Sbjct 1793973 CCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAAG 1794032 Query 39737 ATGCCTTCTACTGCTGCAAATGCAACAAG 39765 || || || || || || || ||||| || Sbjct 1794033 ATACCCTCGACAGCAGCGAAGGCAACCAG 1794061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908267645680