Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq10 246 4e-60 seq54 141 1e-28 >seq10 Length=3304607 Score = 246 bits (272), Expect = 4e-60 Identities = 579/867 (67%), Gaps = 19/867 (2%) Strand=Plus/Plus Query 118702 TAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTA 118761 |||||||||| | || |||| || || |||| | |||||| | || ||||||| | Sbjct 1364194 TAGGAAGGGCAAGAGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACTGTACTCGA 1364253 Query 118762 TAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTG 118821 | || || ||||||| ||| || || ||| || |||| |||||| || || ||| Sbjct 1364254 TGATCTCAGTGCACAGGTTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTCT 1364313 Query 118822 TGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAA 118881 |||| || ||||||||||| |||||| | || | || ||||| || |||| || |||| Sbjct 1364314 TGTTGCAAGCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAA 1364373 Query 118882 TAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGG---CTCGCCCCTCTTCCTCG 118937 | || | ||||| | || | ||| | | ||| ||| | || ||||| | |||| Sbjct 1364374 TGGCATACCAGAGCTTCTG-AGC---CTTAATGGTCTTGCGGCCACGGCCCTCCTTCTCG 1364429 Query 118938 TACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTA 118997 ||||| |||||| || || ||||| ||||| | | || | ||| || | |||| Sbjct 1364430 TACTTCTCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCGAGACCAGAGGCCTCG 1364489 Query 118998 TCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGG 119057 | ||||||||||||| ||| | ||| ||||||| ||||||||||| || || || Sbjct 1364490 TTGGGGCAGAAGAGAGTCCAGTCACCGTTAGCCTCAACACGCTTCATGAACAGATCAGGA 1364549 Query 119058 ATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGC 119117 ||||||| || ||||||||||||| ||| ||||||| | || || || ||| Sbjct 1364550 GTCCAGAGAGCGTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACCGTGGTTCTTACGG 1364609 Query 119118 AACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCC 119177 | || | || || | || ||| |||||||| || |||||||| | || | || | Sbjct 1364610 AGATCGAGGAACTCGAAGACATCTGCGTGCCAGGGCTCCAGGTAGATGGCAA---ACGCA 1364666 Query 119178 TTACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGC 119231 | | || |||| |||||| || || | |||||| || || ||||| ||| Sbjct 1364667 CCAGGGCGCTTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTATTGAACACACGGAGC 1364726 Query 119232 ATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTG 119291 || |||| ||||||| ||| |||||| || || | ||| || |||| | | Sbjct 1364727 ATAGGAACAATACCATTGGAGGAGCCATTGGTTCCACCAATGTAGGAACCGGTGGCACGG 1364786 Query 119292 ACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTG 119351 | ||| | | || |||||| || || || ||| || || || || | | Sbjct 1364787 ATGCGGTGAACATTCAAACCAATGCCACCAGCGGTCTTGGAAATCATAGCACAGGTCTTA 1364846 Query 119352 AGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGAC 119411 ||| || ||||||| || || || ||| | | ||| |||||||| | Sbjct 1364847 AGAGTGTCGTAGATACCCTCAATGCTGTCTGCGGACATGTCGACCAGGAAGCAAGAAGCA 1364906 Query 119412 ATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATAC-C 119470 | || ||| ||| || | |||||||||||||| || | |||||| |||| ||| Sbjct 1364907 AGCTGGGGCTGGGGAGTGGCGGCGTTGAAGAGAGTGGGGGAGGCGTGGGTGAA-GTACTT 1364965 Query 119471 TTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGAT 119530 |||||||||| || ||||||||| | | | ||||| || ||||| ||||||| Sbjct 1364966 TTGGGACATCAAGTGGTAGGTCTCAATGGCCTTCTCGATGTCCTCGCCGTGGATACCGAC 1365025 Query 119531 CGAGACCCGCATAAACATGTATTGGGG 119557 | || ||||| | || || ||||| Sbjct 1365026 AGCAACGCGCATCAGCAGGTGCTGGGG 1365052 >seq54 Length=3157102 Score = 141 bits (156), Expect = 1e-28 Identities = 303/450 (67%), Gaps = 2/450 (0%) Strand=Plus/Plus Query 129727 ATAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 129786 |||||| || || ||||||||||||||||| ||||| || ||| | ||| |||||| Sbjct 1793627 ATAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCAT 1793686 Query 129787 AAAATCAAATGGGTTCTTTGAGTTCCAA-ATTGCTGGCACTCCAATCTGTTTGAGGAGAC 129845 || || || ||||| ||||| | | | || | |||| |||||||| Sbjct 1793687 GAAGTCGAAGGGGTTGGCAGAGTTGTAGTACTTCTTGTTG-CCAAGGGCCACGAGGAGAC 1793745 Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTAC 129905 | || | ||| |||| ||||||| |||| || || |||||| || | ||| || Sbjct 1793746 GGTCAGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCAAGCAGGCCAC 1793805 Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965 | || || ||||| || |||| ||| ||| || | || || || | |||| | | Sbjct 1793806 AGGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATACCAACGGCCTCGACAATGATGTCTT 1793865 Query 129966 GAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCCT 130025 || | || | |||| | | | || |||||| || || || Sbjct 1793866 CAACGACCTTGGGATCAGGGCGGTGGTTCAGGTGAGAGAAGAGGAGACAAGCGAAATCAG 1793925 Query 130026 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGAC 130085 |||||||||||||||||| || |||||||| || |||||| ||||| ||||| |||| Sbjct 1793926 TGTGGAGACCCTCGTCACGAGAAATGAGTTCGTTGGAGAAGGTGAGACCGGGCATCAGAC 1793985 Query 130086 CCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACAC 130145 | |||||||| | |||||| || | || || |||||||||||||| ||||| ||| Sbjct 1793986 CACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAAGATACCCTCGACAG 1794045 Query 130146 ACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 ||||| |||| |||||| ||| |||| Sbjct 1794046 CAGCGAAGGCAACCAGACGCGAAGCGAAGG 1794075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434720712720