Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq10 194 2e-44 seq54 150 2e-31 seq27 105 8e-18 >seq10 Length=3304607 Score = 194 bits (214), Expect = 2e-44 Identities = 510/770 (66%), Gaps = 15/770 (2%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| || || | |||||||| || ||||||| || || || ||||| || | | Sbjct 1365052 CCCCAGCACCTGCTGATGCGCGTTGCTGTCGGTATCCACGGCGAGGACATCGAGAAGGCC 1364993 Query 104282 TTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| ||| || |||||||||| ||| |||| ||||| | || || ||||| Sbjct 1364992 ATTGAGACCTACCACTTGATGTCCCAAAAGTAC-TTCACCCACGCCTCCCCCACTCTCTT 1364934 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| || | || || ||||| | | ||||||||| ||| || | || Sbjct 1364933 CAACGCCGCCACTCCCCAGCCCCAGCTTGCTTCTTGCTTCCTGGTCGACATGTCCGCAGA 1364874 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 | || | |||||||| | ||||||| | ||||| || || ||| ||||| Sbjct 1364873 CAGCATTGAGGGTATCTACGACACTCTTAAGACCTGTGCTATGATTTCCAAGACCGCTGG 1364814 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520 || ||||| || | | || | | |||| || ||| | || || || Sbjct 1364813 TGGCATTGGTTTGAATGTTCACCGCATCCGTGCCACCGGTTCCTACATTGGTGGAACCAA 1364754 Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580 ||| || |||||||| |||| ||||| || || || || ||| || ||||| || Sbjct 1364753 TGGCTCCTCCAATGGTATTGTTCCTATGCTCCGTGTGTTCAATAACACTGCCCGCTACGT 1364694 Query 104581 AAATCAAGCTGGGCGTCGAAAGGGATCTA------TCGCAGTCTATCTTGAGCCATGGCA 104634 | || | ||| | ||| | || | || |||| || ||||| ||||| Sbjct 1364693 TGACCAGGGTGG---TAACAAGCGCCCTGGTGCGTTTGCCATCTACCTGGAGCCCTGGCA 1364637 Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694 ||| ||| || | |||||||| || | ||| ||||| ||| | || || | || Sbjct 1364636 CGCAGATGTCTTCGAGTTCCTCGATCTCCGTAAGAACCACGGTAAGGAAGAAGTTCGTGC 1364577 Query 104695 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 104754 ||| |||||||||| ||||||||||| ||| ||||| ||||||||| | ||||||| | Sbjct 1364576 CCGGGATCTCTTCTACGCTCTCTGGACTCCTGATCTGTTCATGAAGCGTGTTGAGGCTAA 1364517 Query 104755 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGA 104814 || | ||| ||||||| || || || |||| |||||||| | |||| | ||||| Sbjct 1364516 CGGTGACTGGACTCTCTTCTGCCCCAACGAGGCCTCTGGTCTCGCTGATGTCTACGGTGA 1364457 Query 104815 GGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCG-GGCGACTGCGACGGTGC 104873 ||||| || || || ||| ||||||||| | || || || ||| | ||| | Sbjct 1364456 TGAGTTCGAGGCTCTCTACGAGAAGTACGAGAAGGAGGGCCGTGGCCGC-AAGACCATTA 1364398 Query 104874 CAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAC 104932 ||| | || | | ||| | || ||||| || | || || |||||||||| || | | Sbjct 1364397 AGGCT-CAGAAGCTCTGGTATGCCATTCTTGAGGCCCAGACTGAGACTGGTAACCCCTTC 1364339 Query 104933 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGG 104982 ||||| ||||| || || || ||| | ||||| || || ||||| |||| Sbjct 1364338 ATGCTGTACAAGGATGCTTGCAACAAGAAGAGCAACCAGAAGAACCTGGG 1364289 >seq54 Length=3157102 Score = 150 bits (166), Expect = 2e-31 Identities = 163/215 (76%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 94733 CAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT---TGATACAAAGT 94789 ||||||| |||||| ||||| || || ||||| || ||| | ||| || ||| Sbjct 1794138 CAGTTCCCTGTATTGCCAAGAAGGCCGAGTGGGCCATCCGTTGGATCAATGACACTGAGT 1794079 Query 94790 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849 || |||| ||| ||| || | || || || ||| ||||||||||||||||||| Sbjct 1794078 CGA---CCTTCGCTTCGCGTCTGGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCTG 1794022 Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909 |||||||| | | || | |||||||||||||| ||||| ||||| |||||| ||||| Sbjct 1794021 GTTCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGTCTCACCTTCT 1793962 Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 ||||||| || || |||||||||||||| |||||| Sbjct 1793961 CCAACGAACTCATTTCTCGTGACGAGGGTCTCCAC 1793927 >seq27 Length=4901019 Score = 105 bits (116), Expect = 8e-18 Identities = 167/236 (71%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 9694 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGAC 9753 |||||| | |||||| || ||||||||||||| ||||| || || | ||| ||| Sbjct 2129989 CTTTCCAATGGCATCGATTTCATCAATGAAGATAATGCAGGGAGTGTTCTTGCGCGCGTT 2129930 Query 9754 TTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG- 9812 | |||||||| || ||||| || || ||||| || |||||||| || || | | Sbjct 2129929 GGCGAAGAGATCACGGACACGAGAGGGACCGACACCGACGAACATCTCAACGAACTCGGA 2129870 Query 9813 -CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9871 | | | ||| || | |||||| || ||||||||| ||| |||| ||| || || Sbjct 2129869 ACCACTG-ACACTGTA-GAAGGGCACGCCAGATTCACCGGCAGTGGCCTTGGCAAGCAGG 2129812 Query 9872 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927 |||||||| ||||| || ||| | ||| | ||||| || || |||||||| || Sbjct 2129811 GTCTTACCAGTACCGGGAGGACCAGAGAGAATAGCACCGCGGGGGATCTTGGCACC 2129756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260347972880