Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03-
04] 62 sequences; 34,340,580 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq8 185 3e-41
seq36 154 4e-32
>seq8
Length=3887683
Score = 185 bits (204), Expect = 3e-41
Identities = 683/1061 (64%), Gaps = 12/1061 (1%)
Strand=Plus/Plus
Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669
||||| || ||||| || ||||| || || || | |||||| || || || || ||
Sbjct 1255522 GCTGTCATCACTGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGACGCC 1255581
Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729
|| |||||| || | || || || | || ||||| || ||||||||||| || ||
Sbjct 1255582 GGTCTCATTGCTGGTCTCAACGTCCTCCGTATCATTAACGAGCCCACTGCTGCTGCTATC 1255641
Query 349730 GCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789
|| || || ||||| || | | || || || | || || || ||| | |||
Sbjct 1255642 GCTTACGGTCTTGACAAGAAGGTCGAGGGTGAGCGCAACGTCCTGATCTTCGATCTGGGT 1255701
Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849
|||||||| || ||||| || || || || | || ||||| || || || || || |
Sbjct 1255702 GGTGGTACCTTCGATGTGTCTCTCCTCACCATCGAGGAGGGTATCTTCGAGGTCAAGTCC 1255761
Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909
|||||||||||||| || |||||||| || || || || || |||||||| || ||
Sbjct 1255762 ACTGCTGGTGATACTCACCTTGGTGGTGAGGACTTCGACAACCGTCTCGTCAACCACTTC 1255821
Query 349910 GTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCG 349968
|| || || || ||||| ||||| || | || | || | | || | ||
Sbjct 1255822 GTCAACGAGTTCAAGCG-CAAGCACAAGAAGGACCTGACTACCAACGCCCGTGCCCTCCG 1255880
Query 349969 TCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTC 350028
||| || | ||||| || || |||||||||||| || | || ||| || | || |||||
Sbjct 1255881 TCGTCTCCGCACTGCTTGCGAGCGTGCTAAGCGTACCCTCTCTTCTGCTGCTCAGACCTC 1255940
Query 350029 TATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCG 350088
||||| || || ||||| || || | || |||| | | || || || ||||| ||
Sbjct 1255941 CATTGAGATCGACTCTCTCTTCGAGGGTATCGACTTCTATACTTCCATCACCCGTGCCCG 1256000
Query 350089 GTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATT 350148
|| || || | || ||| || || | | || ||||| || || || || |
Sbjct 1256001 TTTCGAGGAGCTCTGCCAGGACCTCTTCCGTGGCACCATGGAGCCCGTCGAGCGTGTCCT 1256060
Query 350149 AAAAGATGC-AAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTA 350207
|| || || | || | | || | | | || | || | || ||||||||||
Sbjct 1256061 CCGCGACGCTAAGATTGACAAGTCCTCCG-TCCACGAGATCGTCCTCGTCGGTGGTTCTA 1256119
Query 350208 CACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAA-CCTTCT 350266
| ||||| || || | || || | | || || || || || ||| ||| || |
Sbjct 1256120 CCCGTATCCCCAAGATCCAGAAGCTCGTTTCCGACTTCTTCAA---CAAGGAAGCCAACA 1256176
Query 350267 AGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTA 350326
|| || || || || ||||| || ||||| || ||||| || || ||||| |||| |
Sbjct 1256177 AG-TCCATCAACCCCGATGAGGCCGTTGCCTACGGTGCCGCAGTCCAGGCCGCTATCCTG 1256235
Query 350327 TCTGGAAATAAGAGTTCTAA---AATTGATGATCTATTACTACTAGATGTAACTCCACTT 350383
||||| | || ||| || | | || | | || || || || | || ||
Sbjct 1256236 TCTGGTGACCAGTCTTCCAAGTCCACCAACGAGATCCTCCTGCTCGACGTTGCCCCTCTG 1256295
Query 350384 TCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACT 350443
|| || || | || ||| | |||| || ||||||| ||| || | || | |||
Sbjct 1256296 TCCCTCGGTATCGAGACTGCCGGTGGTGTCATGACTGCTCTGATCAAGCGTAACACCACT 1256355
Query 350444 GTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACA 350503
| || || || |||||| | || || || || | | || || ||||| | ||
Sbjct 1256356 ATCCCCACCAAGAAGTCCGAGACCTTCTCCACCTACTCCGACAACCAGCCCGGTGTCCTG 1256415
Query 350504 ATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTT 350563
|| || || || || ||||| ||||||||||| || || || || || || | ||
Sbjct 1256416 ATCCAGGTCTTCGAGGGTGAGCGTGCTCGCACCAAGGACAACAACTTGCTCGGCAAGTTC 1256475
Query 350564 ACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGAT 350623
|| | || ||||| || || | || || || |||||||| ||| | |||||
Sbjct 1256476 GAGCTCACTGGCATTCCCCCCGCCCCCCGTGGTGTCCCCCAGATTGAGGTCACCTTCGAC 1256535
Query 350624 ATTGATTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAA 350664
|||| | || || || | || || |||| || || ||
Sbjct 1256536 CTTGACGCCAACGGAATCATGAACGTCTCCGCCGTCGAGAA 1256576
Score = 109 bits (120), Expect = 2e-18
Identities = 102/129 (79%), Gaps = 3/129 (2%)
Strand=Plus/Plus
Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517
|| || |||||| | || || ||| ||||||| ||||||||||||||||| || ||
Sbjct 215705 CGGGGTACACCAAGGGTGACGTTC---TTAGATGACACACCAGCAAAGTGGAAGGTGTTC 215761
Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577
|| || | ||||||| ||||||||||| ||||| ||||||| || |||||||||||
Sbjct 215762 AGGGTCATCTGAGTAGCAGGCTCACCAATAGACTGGGCTGCAAGGACACCAACCATTTCA 215821
Query 377578 CCAGGATTG 377586
||||| |||
Sbjct 215822 CCAGGGTTG 215830
>seq36
Length=2049559
Score = 154 bits (170), Expect = 4e-32
Identities = 175/235 (74%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | || || ||||| ||||| ||||| || || || || |
Sbjct 284431 TTTGCATACCACCACGGAGGCGGAGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGT 284372
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || | || || ||||| ||||| || ||||| || ||||| ||||| ||||| |
Sbjct 284371 AGTCGGAGAGAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGT 284312
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| ||||| || || || ||||||||||| || | || || || || || | || || |
Sbjct 284311 CGGGAGGGATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAAG 284252
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||||||||| || | ||||||||||| || || ||||| || || |||||
Sbjct 284251 ACTCAACTTCAAGAGTGATGGTCTTTCCGGTGAGGGTCTTTACGAAGATTTGCAT 284197
Score = 154 bits (170), Expect = 4e-32
Identities = 175/235 (74%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | || ||||| || ||||| || || ||||| || || |
Sbjct 284659 TTTGCATACCACCACGGAGACGGAGGACAAGGTGCAGAGTGGATTCCTTTTGGATGTTGT 284600
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || | || || ||||| ||||| || || || |||||||| ||||||||||| |
Sbjct 284599 AGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCAAAGATAAGACGTTGCTGGT 284540
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
|||| || || ||||| |||||||| || || | || || ||||| || | ||| || |
Sbjct 284539 CAGGGGGGATGCCTTCCTTATCCTGGATCTTTGACTTGACGTTATCGATGGTATCCGACG 284480
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || || || | ||||||||||| || || || || ||||| |||||
Sbjct 284479 ACTCTACCTCCAGAGTGATGGTCTTTCCGGTGAGGGTCTTCACGAAAATTTGCAT 284425
Score = 129 bits (142), Expect = 2e-24
Identities = 155/211 (73%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | || ||||| ||||| || ||||| || ||||| || |
Sbjct 284203 TTTGCATACCACCACGGAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGT 284144
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || | || || ||||| ||||| || || || || || || || || ||||| |
Sbjct 284143 AGTCGCTCAGGGTACGGCCATCCTCAAGCTGCTTGCCTGCGAAAATCAGGCGCTGCTGGT 284084
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
|||||||||| ||||| ||||||||||| || | || ||||| || || | || || |
Sbjct 284083 CAGGAGGAATGCCTTCCTTATCCTGAATCTTGGACTTGACATTGTCGATGGTGTCGGAAG 284024
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713
||||| ||||| || | ||||| |||||
Sbjct 284023 ACTCAACCTCAAGAGTGATGGTCTTGCCGGT 283993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515253196319786
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |