Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq8 185 3e-41 seq36 154 4e-32 >seq8 Length=3887683 Score = 185 bits (204), Expect = 3e-41 Identities = 683/1061 (64%), Gaps = 12/1061 (1%) Strand=Plus/Plus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 ||||| || ||||| || ||||| || || || | |||||| || || || || || Sbjct 1255522 GCTGTCATCACTGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGACGCC 1255581 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || |||||| || | || || || | || ||||| || ||||||||||| || || Sbjct 1255582 GGTCTCATTGCTGGTCTCAACGTCCTCCGTATCATTAACGAGCCCACTGCTGCTGCTATC 1255641 Query 349730 GCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789 || || || ||||| || | | || || || | || || || ||| | ||| Sbjct 1255642 GCTTACGGTCTTGACAAGAAGGTCGAGGGTGAGCGCAACGTCCTGATCTTCGATCTGGGT 1255701 Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849 |||||||| || ||||| || || || || | || ||||| || || || || || | Sbjct 1255702 GGTGGTACCTTCGATGTGTCTCTCCTCACCATCGAGGAGGGTATCTTCGAGGTCAAGTCC 1255761 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909 |||||||||||||| || |||||||| || || || || || |||||||| || || Sbjct 1255762 ACTGCTGGTGATACTCACCTTGGTGGTGAGGACTTCGACAACCGTCTCGTCAACCACTTC 1255821 Query 349910 GTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCG 349968 || || || || ||||| ||||| || | || | || | | || | || Sbjct 1255822 GTCAACGAGTTCAAGCG-CAAGCACAAGAAGGACCTGACTACCAACGCCCGTGCCCTCCG 1255880 Query 349969 TCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTC 350028 ||| || | ||||| || || |||||||||||| || | || ||| || | || ||||| Sbjct 1255881 TCGTCTCCGCACTGCTTGCGAGCGTGCTAAGCGTACCCTCTCTTCTGCTGCTCAGACCTC 1255940 Query 350029 TATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCG 350088 ||||| || || ||||| || || | || |||| | | || || || ||||| || Sbjct 1255941 CATTGAGATCGACTCTCTCTTCGAGGGTATCGACTTCTATACTTCCATCACCCGTGCCCG 1256000 Query 350089 GTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATT 350148 || || || | || ||| || || | | || ||||| || || || || | Sbjct 1256001 TTTCGAGGAGCTCTGCCAGGACCTCTTCCGTGGCACCATGGAGCCCGTCGAGCGTGTCCT 1256060 Query 350149 AAAAGATGC-AAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTA 350207 || || || | || | | || | | | || | || | || |||||||||| Sbjct 1256061 CCGCGACGCTAAGATTGACAAGTCCTCCG-TCCACGAGATCGTCCTCGTCGGTGGTTCTA 1256119 Query 350208 CACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAA-CCTTCT 350266 | ||||| || || | || || | | || || || || || ||| ||| || | Sbjct 1256120 CCCGTATCCCCAAGATCCAGAAGCTCGTTTCCGACTTCTTCAA---CAAGGAAGCCAACA 1256176 Query 350267 AGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTA 350326 || || || || || ||||| || ||||| || ||||| || || ||||| |||| | Sbjct 1256177 AG-TCCATCAACCCCGATGAGGCCGTTGCCTACGGTGCCGCAGTCCAGGCCGCTATCCTG 1256235 Query 350327 TCTGGAAATAAGAGTTCTAA---AATTGATGATCTATTACTACTAGATGTAACTCCACTT 350383 ||||| | || ||| || | | || | | || || || || | || || Sbjct 1256236 TCTGGTGACCAGTCTTCCAAGTCCACCAACGAGATCCTCCTGCTCGACGTTGCCCCTCTG 1256295 Query 350384 TCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACT 350443 || || || | || ||| | |||| || ||||||| ||| || | || | ||| Sbjct 1256296 TCCCTCGGTATCGAGACTGCCGGTGGTGTCATGACTGCTCTGATCAAGCGTAACACCACT 1256355 Query 350444 GTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACA 350503 | || || || |||||| | || || || || | | || || ||||| | || Sbjct 1256356 ATCCCCACCAAGAAGTCCGAGACCTTCTCCACCTACTCCGACAACCAGCCCGGTGTCCTG 1256415 Query 350504 ATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTT 350563 || || || || || ||||| ||||||||||| || || || || || || | || Sbjct 1256416 ATCCAGGTCTTCGAGGGTGAGCGTGCTCGCACCAAGGACAACAACTTGCTCGGCAAGTTC 1256475 Query 350564 ACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGAT 350623 || | || ||||| || || | || || || |||||||| ||| | ||||| Sbjct 1256476 GAGCTCACTGGCATTCCCCCCGCCCCCCGTGGTGTCCCCCAGATTGAGGTCACCTTCGAC 1256535 Query 350624 ATTGATTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAA 350664 |||| | || || || | || || |||| || || || Sbjct 1256536 CTTGACGCCAACGGAATCATGAACGTCTCCGCCGTCGAGAA 1256576 Score = 109 bits (120), Expect = 2e-18 Identities = 102/129 (79%), Gaps = 3/129 (2%) Strand=Plus/Plus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 || || |||||| | || || ||| ||||||| ||||||||||||||||| || || Sbjct 215705 CGGGGTACACCAAGGGTGACGTTC---TTAGATGACACACCAGCAAAGTGGAAGGTGTTC 215761 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 || || | ||||||| ||||||||||| ||||| ||||||| || ||||||||||| Sbjct 215762 AGGGTCATCTGAGTAGCAGGCTCACCAATAGACTGGGCTGCAAGGACACCAACCATTTCA 215821 Query 377578 CCAGGATTG 377586 ||||| ||| Sbjct 215822 CCAGGGTTG 215830 >seq36 Length=2049559 Score = 154 bits (170), Expect = 4e-32 Identities = 175/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || ||||| ||||| ||||| || || || || | Sbjct 284431 TTTGCATACCACCACGGAGGCGGAGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGT 284372 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || ||||| ||||| || ||||| || ||||| ||||| ||||| | Sbjct 284371 AGTCGGAGAGAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGT 284312 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | ||||| || || || ||||||||||| || | || || || || || | || || | Sbjct 284311 CGGGAGGGATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAAG 284252 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||||||||| || | ||||||||||| || || ||||| || || ||||| Sbjct 284251 ACTCAACTTCAAGAGTGATGGTCTTTCCGGTGAGGGTCTTTACGAAGATTTGCAT 284197 Score = 154 bits (170), Expect = 4e-32 Identities = 175/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || ||||| || ||||| || || ||||| || || | Sbjct 284659 TTTGCATACCACCACGGAGACGGAGGACAAGGTGCAGAGTGGATTCCTTTTGGATGTTGT 284600 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || ||||| ||||| || || || |||||||| ||||||||||| | Sbjct 284599 AGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCAAAGATAAGACGTTGCTGGT 284540 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| || || ||||| |||||||| || || | || || ||||| || | ||| || | Sbjct 284539 CAGGGGGGATGCCTTCCTTATCCTGGATCTTTGACTTGACGTTATCGATGGTATCCGACG 284480 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || | ||||||||||| || || || || ||||| ||||| Sbjct 284479 ACTCTACCTCCAGAGTGATGGTCTTTCCGGTGAGGGTCTTCACGAAAATTTGCAT 284425 Score = 129 bits (142), Expect = 2e-24 Identities = 155/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || ||||| ||||| || ||||| || ||||| || | Sbjct 284203 TTTGCATACCACCACGGAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGT 284144 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || | || || ||||| ||||| || || || || || || || || ||||| | Sbjct 284143 AGTCGCTCAGGGTACGGCCATCCTCAAGCTGCTTGCCTGCGAAAATCAGGCGCTGCTGGT 284084 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||||||||| ||||| ||||||||||| || | || ||||| || || | || || | Sbjct 284083 CAGGAGGAATGCCTTCCTTATCCTGAATCTTGGACTTGACATTGTCGATGGTGTCGGAAG 284024 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713 ||||| ||||| || | ||||| ||||| Sbjct 284023 ACTCAACCTCAAGAGTGATGGTCTTGCCGGT 283993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515253196319786