Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03-
04] 62 sequences; 34,340,580 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq36 176 5e-39
seq54 143 3e-29
seq27 123 3e-23
seq26 93.3 5e-14
seq10 87.8 2e-12
>seq36
Length=2049559
Score = 176 bits (194), Expect = 5e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| || ||||| || ||||| ||||| || |||||||| ||||||||
Sbjct 284197 ATGCAAATCTTCGTAAAGACCCTCACCGGAAAGACCATCACTCTTGAAGTTGAGTCTTCC 284256
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||| | || |||||||| |||||||| || ||||| ||||||
Sbjct 284257 GACACCATCGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCTCCCGACCAG 284316
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || || || ||||| || ||||||| ||| || || | ||||| ||
Sbjct 284317 CAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGATGGTCGCACTCTCTCCGACTACAAC 284376
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| |||||||| ||||| ||| | || || || |||||
Sbjct 284377 ATCCAGAAGGAGTCCACTCTCCATCTCGTCCTCCGCCTCCGTGGTGG 284423
Score = 170 bits (188), Expect = 2e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || ||||| || ||||| ||||| || ||||| ||||| |||||
Sbjct 284425 ATGCAAATTTTCGTGAAGACCCTCACCGGAAAGACCATCACTCTGGAGGTAGAGTCGTCG 284484
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | || | ||| | || || ||||| ||||| || || || || ||||||
Sbjct 284485 GATACCATCGATAACGTCAAGTCAAAGATCCAGGATAAGGAAGGCATCCCCCCTGACCAG 284544
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||||| || ||||| |||||||| || ||||||| || ||||| | ||||| ||
Sbjct 284545 CAACGTCTTATCTTTGCCGGTAAGCAGCTTGAGGATGGCCGCACCCTGTCCGACTACAAC 284604
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
||||||||||||||||||| || || ||| | ||||| || |||||
Sbjct 284605 ATCCAAAAGGAATCCACTCTGCACCTTGTCCTCCGTCTCCGTGGTGG 284651
Score = 158 bits (174), Expect = 1e-33
Identities = 159/204 (78%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
||||||||||| || ||||||||||||||||| || | ||| | ||| | ||| |
Sbjct 283993 ACCGGCAAGACCATCACTCTTGAGGTTGAGTCTTCCGACACCATCGACAATGTCAAGTCC 284052
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| |||||||| ||||| || |||||||| ||||||||||| || ||||| || || |||
Sbjct 284053 AAGATTCAGGATAAGGAAGGCATTCCTCCTGACCAGCAGCGCCTGATTTTCGCAGGCAAG 284112
Query 27550 CAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608
|| || ||||||| |||||||| ||| ||||| || | || ||||| ||||| |||||
Sbjct 284113 CAGCTTGAGGATGGCCGTACCCTGAGC-GACTACAACATTCAGAAGGAGTCCACCCTTCA 284171
Query 27609 TCTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||| | || || || |||||
Sbjct 284172 CCTTGTCCTCCGCCTCCGTGGTGG 284195
Score = 140 bits (154), Expect = 4e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||||||||| || || |||||||| || || || || || || ||| |
Sbjct 284653 ATGCAAATTTTTGTCAAGACACTCACTGGCAAGACCATCACGCTGGAAGTGGAATCATCT 284712
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| || || |||||||||||||| || || |||||||||
Sbjct 284713 GACACGATCGACAACGTTAAGAGCAAGATCCAGGACAAGGAGGGTATCCCCCCAGACCAG 284772
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || || |||||||| || ||||| | || ||||| | ||||| |||
Sbjct 284773 CAGCGTCTTATCTTCGCCGGTAAGCAGCTGGAGGACGGGCGCACCCTTTCTGACTACAAT 284832
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
|||| ||||| || || || | || | ||||| || ||||| ||
Sbjct 284833 ATCCAGAAGGAGAGTACCCTGCACTTGGTGCTCCGTCTGCGTGGTGGTCA 284882
>seq54
Length=3157102
Score = 143 bits (158), Expect = 3e-29
Identities = 332/497 (67%), Gaps = 9/497 (2%)
Strand=Plus/Minus
Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGATGAAT---CGTGGGTCGTCGTTTGGTCAGCGT 64719
|| ||||| || ||||||||||| ||||| ||| || |||| | || | | ||||
Sbjct 1794121 AAGAAGGCCGAGTGGGCCATCCGTTGGATCAATGACACTGAGTCGACCTTCGCTTCGCGT 1794062
Query 64720 CTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTC 64779
|| | || || || ||| || || || ||||| ||||| || ||| || || |||
Sbjct 1794061 CTGGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGTTCCTTCGCCTCCATCTTC 1794002
Query 64780 TGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGG 64839
||||| || ||||| || |||||||| ||||| | || || ||||| || || |||||
Sbjct 1794001 TGGCTCAAGAAGCGTGGTCTGATGCCCGGTCTCACCTTCTCCAACGAACTCATTTCTCGT 1793942
Query 64840 GACGAGGGGCTCCACCAAGAATTTGCGGTTACCCTGTTCAGCCACCTCAAGGACAAACC- 64898
|||||||| |||||| || || || | ||| ||| ||||| || || ||
Sbjct 1793941 GACGAGGGTCTCCACACTGATTTCGCTTGTCTCCTCTTCTCTCACCTGAACCACCGCCCT 1793882
Query 64899 -ATCACATGGGACTATAATTGAT-ATAGTAAAATCGGCTGTAGAAATTGAAAAGGAATTC 64956
||| || || | || || || || | ||| || | || || |||| |||
Sbjct 1793881 GATCCCAAGGTCGTTGAAGACATCATTGTCGA---GGCCGTTGGTATCGAGCAGGAGTTC 1793825
Query 64957 ATTACTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGCCGATAAGATGAAACAGTAT 65016
| |||| ||| ||||| ||| | || | |||||| | ||| | ||| |||||
Sbjct 1793824 CTCACTGACGCTCTTCCCTGTGGCCTGCTTGGCATGAACGCCAAGCTCATGTGCCAGTAC 1793765
Query 65017 ATCGAATTTGTAGCAGATCGCCTGCTTACTCAGTTTGGTATTAAGCCCTACTGGAATTCT 65076
||||| ||||| || || || || || |||| | ||| |||| || |||
Sbjct 1793764 ATCGAGTTTGTCGCTGACCGTCTCCTCGTGGCCCTTGGCAACAAGAAGTACTACAACTCT 1793705
Query 65077 TCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGGAAGACTAACTTTTTTGAA 65136
| || || || |||| |||||| | ||| ||||| || ||||| ||||| || ||
Sbjct 1793704 GCCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAACTTCTTCGAG 1793645
Query 65137 AAGAGGGTAGGTGATTA 65153
||| | || ||||| ||
Sbjct 1793644 AAGCGTGTCGGTGACTA 1793628
>seq27
Length=4901019
Score = 123 bits (136), Expect = 3e-23
Identities = 140/185 (76%), Gaps = 2/185 (1%)
Strand=Plus/Minus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| |||||||| || || || ||||| ||||| || || || ||||| | || | |||
Sbjct 3950799 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 3950740
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| || | ||| | || || |||||||||||||| ||||| || ||||||||||| ||
Sbjct 3950739 GACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCGCCTG 3950680
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAA 27593
|| || || || ||||| |||||||||| || ||||| ||| ||||| || |||| ||
Sbjct 3950679 ATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGC-GACTACAACATCCAGAA 3950621
Query 27594 GGAAT 27598
|| ||
Sbjct 3950620 GGTAT 3950616
>seq26
Length=2837646
Score = 93.3 bits (102), Expect = 5e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
||||||||||| || || || ||||||||||| || || || || || ||||| ||||||
Sbjct 1001109 GACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 1001050
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|| | || || || | ||||| || |||| ||||| || || ||||| || ||| |
Sbjct 1001049 GACGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTCCTC 1000990
Query 27619 CGTCTTCGCGGTGG 27632
|| || || |||||
Sbjct 1000989 CGCCTGCGTGGTGG 1000976
>seq10
Length=3304607
Score = 87.8 bits (96), Expect = 2e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097
|| |||| ||||||||||| ||||| || ||| ||||||||||| | |||||| ||
Sbjct 1363326 GTGCGCAAGTAGTACATGCCGGTCTTCAGACCCATCTTCCAGCCGGCGAAGTGCATGGAG 1363385
Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157
||| ||| | | ||||| | || || | ||||||||| ||||| ||||| ||||
Sbjct 1363386 GTGATCTTGCCCATGGTGGGCTCCTTCAGGTGGATGTTCAGGGACTGGGACTGGTCGATG 1363445
Query 80158 AAAGCCCCACGATCTGCCGCCAT 80180
| || || || || || |||||
Sbjct 1363446 TAGGCACCGCGGTCGGCGGCCAT 1363468
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570309958009440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |