Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03-
04] 62 sequences; 34,340,580 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq36 104 2e-17
>seq36
Length=2049559
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || ||||| || || ||||| ||| | || ||||||||||| || | |||
Sbjct 284197 ATGCAAATCTTCGTAAAGACCCTCACCGGAAAGACCATCACTCTTGAAGTTGAGTCTTCC 284256
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || ||||| || || || || || || ||||| ||
Sbjct 284257 GACACCATCGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCTCCCGACCAG 284316
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | |||||| || || | || || || || | ||||| ||||||
Sbjct 284317 CAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGATGGTCGCACTCTCTCCGACTACAAC 284376
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| || | ||| | || | || | || ||||| ||
Sbjct 284377 ATCCAGAAGGAGTCCACTCTCCATCTCGTCCTCCGCCTCCGTGGTGGTAT 284426
Score = 87.8 bits (96), Expect = 2e-12
Identities = 125/176 (71%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 27010 TGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAAC 27069
||||||||||| | || |||||||| || || | |||||| | || || | |||||
Sbjct 283991 TGACCGGCAAGACCATCACTCTTGAGGTTGAGTCTTCCGACACCATCGACAATGTCAAGT 284050
Query 27070 AAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCA 27129
|| ||||| || || |||||||| || || || || ||||| | || | ||| ||||
Sbjct 284051 CCAAGATTCAGGATAAGGAAGGCATTCCTCCTGACCAGCAGCGCCTGATTTTCGCAGGCA 284110
Query 27130 AACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACC 27185
| || | || || | ||| | ||| ||||||||||| |||||||| |||
Sbjct 284111 AGCAGCTTGAGGATGGCCGTACCCTGAGCGACTACAACATTCAGAAGGAGTCCACC 284166
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434918062938240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |