Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq36 185 2e-41 seq10 147 5e-30 seq27 131 4e-25 seq26 107 4e-18 >seq36 Length=2049559 Score = 185 bits (204), Expect = 2e-41 Identities = 168/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| |||||||| || ||||||||||| || || | ||||| | ||||| Sbjct 284636 AGGACAAGGTGCAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAGGGTGCGGCCATCC 284577 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || || |||||||| ||||| |||||||| || | |||||||| ||| Sbjct 284576 TCAAGCTGCTTACCGGCAAAGATAAGACGTTGCTGGTCAGGGGGGATGCCTTCCTTATCC 284517 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||| || ||||| |||||||| || || || ||||| |||||||| ||| Sbjct 284516 TGGATCTTTGACTTGACGTTATCGATGGTATCCGACGACTCTACCTCCAGAGTGATGGTC 284457 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| ||||| || || | ||||| Sbjct 284456 TTTCCGGTGAGGGTCTTCACGAAAATTTGCAT 284425 Score = 163 bits (180), Expect = 7e-35 Identities = 149/188 (79%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||||||||| |||||||| || || ||||| || || ||||| | ||||| Sbjct 284180 AGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCATCC 284121 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||||||||| || ||||| || ||||||||||||| |||||||| ||| Sbjct 284120 TCAAGCTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCC 284061 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || ||||||||||| || |||||||| |||||||| ||| Sbjct 284060 TGAATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCAAGAGTGATGGTC 284001 Query 211083 TTTCCCGT 211090 || || || Sbjct 284000 TTGCCGGT 283993 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || || ||||||||||| || |||||||| || || | || || | ||||| Sbjct 284408 AGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCC 284349 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| || || || ||||| ||||| | || ||||| ||| Sbjct 284348 TCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTATCC 284289 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| ||||||||||| || ||||| || |||||||| ||| Sbjct 284288 TGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCAACTTCAAGAGTGATGGTC 284229 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| |||||||| || | ||||| Sbjct 284228 TTTCCGGTGAGGGTCTTTACGAAGATTTGCAT 284197 Score = 143 bits (158), Expect = 6e-29 Identities = 147/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 210923 CTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAA 210982 ||| || ||||| || || || | |||||| | || || ||||||||||| || ||||| Sbjct 284844 CTCCTTCTGGATATTGTAGTCAGAAAGGGTGCGCCCGTCCTCCAGCTGCTTACCGGCGAA 284785 Query 210983 GATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTT 211042 |||||| || || ||||| || || | || ||||||||||||||||| || ||||| Sbjct 284784 GATAAGACGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGGATCTTGCTCTTAACGTT 284725 Query 211043 TTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTAC 211102 ||||| |||||||| ||| || || || ||||| ||||| || ||||| ||||| || Sbjct 284724 GTCGATCGTGTCAGATGATTCCACTTCCAGCGTGATGGTCTTGCCAGTGAGTGTCTTGAC 284665 Query 211103 AAACACCTGCAT 211114 ||| | ||||| Sbjct 284664 AAAAATTTGCAT 284653 >seq10 Length=3304607 Score = 147 bits (162), Expect = 5e-30 Identities = 203/283 (72%), Gaps = 6/283 (2%) Strand=Plus/Plus Query 178086 TTCCAAAGTTCTTTTGGTTGCTCTTTCTG---CAAATGGCATCTTTGTACGCAATGAAGG 178142 |||| | |||||| ||||||||||| || ||| ||||| |||||| ||||||| Sbjct 1364287 TTCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAA---GCATCCTTGTACAGCATGAAGG 1364343 Query 178143 GCATTCCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAG 178202 | | || ||||| || ||| | |||||| || ||| |||| ||| || | | Sbjct 1364344 GGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCATACCAGAGCTTCTGAGCCTTAATGG 1364403 Query 178203 TCTTTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCAT 178262 |||| | | || || ||||||||||| | |||||| ||||||| || || | Sbjct 1364404 TCTTGCGGCCACGGCCCTCCTTCTCGTACTTCTCGTAGAGAGCCTCGAACTCATCACCGT 1364463 Query 178263 AGACATCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCT 178322 |||||||| ||||||| | ||||| ||||||||||||||| |||| | ||||| ||| Sbjct 1364464 AGACATCAGCGAGACCAGAGGCCTCGTTGGGGCAGAAGAGAGTCCAGTCACCGTTAGCCT 1364523 Query 178323 TCACTCGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365 || || |||||||| || |||| ||||||| || ||||| Sbjct 1364524 CAACACGCTTCATGAACAGATCAGGAGTCCAGAGAGCGTAGAA 1364566 >seq27 Length=4901019 Score = 131 bits (144), Expect = 4e-25 Identities = 139/182 (76%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || ||||| | ||||| || ||||||||||| |||||||| Sbjct 3950621 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 3950680 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 ||||| || |||||||| |||| || ||||||||||||||||| || ||||| ||| Sbjct 3950681 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 3950740 Query 211047 ATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103 |||||||| ||| || || ||||| || || ||||| ||||| || ||||| || Sbjct 3950741 ATGGTGTC---GCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 3950797 Query 211104 AA 211105 || Sbjct 3950798 AA 3950799 >seq26 Length=2837646 Score = 107 bits (118), Expect = 4e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| |||||||| || ||||| || |||||||| || |||| ||| || | || || Sbjct 1000991 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCGTCC 1001050 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || ||||||||||| |||||||| ||||| || |||||||| || | || |||||||| Sbjct 1001051 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTC 1001109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151079198630