Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943775.1_202015-03- 04] 62 sequences; 34,340,580 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq36 149 1e-30 seq20 118 3e-21 seq27 98.7 2e-15 >seq36 Length=2049559 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| ||||||||||| ||||||| ||||| |||| || || | ||||| Sbjct 284636 AGGACAAGGTGCAGAGTGGATTCCTTTTGGATGTTGTAGTCGGACAGGGTGCGGCCATCC 284577 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || |||||||| ||||| ||||| || || || |||||||| || Sbjct 284576 TCAAGCTGCTTACCGGCAAAGATAAGACGTTGCTGGTCAGGGGGGATGCCTTCCTTATCC 284517 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||||||| ||| || |||||||| || || | || || || | ||||| ||| Sbjct 284516 TGGATCTTTGACTTGACGTTATCGATGGTATCCGACGACTCTACCTCCAGAGTGATGGTC 284457 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | || || | ||| | |||||| Sbjct 284456 TTTCCGGTGAGGGTCTTCACGAAAATTTGCAT 284425 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || ||||||||||| || || |||| ||||| |||| | ||| | ||||| Sbjct 284408 AGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCC 284349 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || || |||||||| || ||||| ||||| || Sbjct 284348 TCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTATCC 284289 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || ||||||||||| || | || || || | ||||| ||| Sbjct 284288 TGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCAACTTCAAGAGTGATGGTC 284229 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | || |||| ||| | |||||| Sbjct 284228 TTTCCGGTGAGGGTCTTTACGAAGATTTGCAT 284197 Score = 122 bits (134), Expect = 2e-22 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| || ||||| || || || | ||||| ||| || || | ||||| Sbjct 284180 AGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCATCC 284121 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || ||||| || || || || ||||| || ||||| |||||||| || Sbjct 284120 TCAAGCTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCC 284061 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| ||| ||||||||||| || | || || || | ||||| ||| Sbjct 284060 TGAATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCAAGAGTGATGGTC 284001 Query 225682 TTGCCCGTCA 225691 ||||| |||| Sbjct 284000 TTGCCGGTCA 283991 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 225523 TCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAG 225582 || || |||| |||||| || | | || | ||| || || |||||||| || |||||| Sbjct 284843 TCCTTCTGGATATTGTAGTCAGAAAGGGTGCGCCCGTCCTCCAGCTGCTTACCGGCGAAG 284784 Query 225583 ATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCT 225642 ||||| || || ||||| || || ||||| |||||||| |||||||| ||| || Sbjct 284783 ATAAGACGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGGATCTTGCTCTTAACGTTG 284724 Query 225643 TCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATG 225702 ||||| ||||| || | |||||| || | |||||| |||||||| || | || || | Sbjct 284723 TCGATCGTGTCAGATGATTCCACTTCCAGCGTGATGGTCTTGCCAGTGAGTGTCTTGACA 284664 Query 225703 AACACTTGCAT 225713 || | |||||| Sbjct 284663 AAAATTTGCAT 284653 >seq20 Length=38536 Score = 118 bits (130), Expect = 3e-21 Identities = 190/269 (71%), Gaps = 7/269 (3%) Strand=Plus/Plus Query 7447 TATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATTATAAGG 7506 |||||||| |||| ||||||||| | || || || ||||||| | ||||||| Sbjct 9946 TATTTAATGTTTGCATTATTTTCTGGTTTAATTGGAACAGCATTTTCTGTACTTATAAGA 10005 Query 7507 TTAGAATTAGCTGCTCCGGGTTCTCAA-ATAT-TGAGTGGTAATAGCCAACTTTACAACG 7564 ||||| ||| | | ||| || |||| |||| | || |||| ||| | || || Sbjct 10006 TTAGAGTTATCAGGTCCAGGAGTTCAATATATATCAGA--TAAT---CAATTATATAATA 10060 Query 7565 TTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAG 7624 ||| || || || || || | | ||||| |||||| | |||||||| | | | |||| Sbjct 10061 GTATAATAACAGCACACGCTATAATGATGATATTCTTTATGGTTATGCCTGCTTTAATAG 10120 Query 7625 GCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAA 7684 | |||||||| |||| || | |||||| | | || | ||| |||||||| ||||| | Sbjct 10121 GAGGTTTCGGTAATTTCTTATTACCTTTATTAGTAGGAGGTCCAGATATGGCATTTCCTA 10180 Query 7685 GGCTTAACAATATAAGTTTTTGATTACTA 7713 | | || ||||||||||| |||||| || Sbjct 10181 GATTAAATAATATAAGTTTCTGATTATTA 10209 Score = 118 bits (130), Expect = 3e-21 Identities = 190/269 (71%), Gaps = 7/269 (3%) Strand=Plus/Plus Query 7447 TATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATTATAAGG 7506 |||||||| |||| ||||||||| | || || || ||||||| | ||||||| Sbjct 38246 TATTTAATGTTTGCATTATTTTCTGGTTTAATTGGAACAGCATTTTCTGTACTTATAAGA 38305 Query 7507 TTAGAATTAGCTGCTCCGGGTTCTCAA-ATAT-TGAGTGGTAATAGCCAACTTTACAACG 7564 ||||| ||| | | ||| || |||| |||| | || |||| ||| | || || Sbjct 38306 TTAGAGTTATCAGGTCCAGGAGTTCAATATATATCAGA--TAAT---CAATTATATAATA 38360 Query 7565 TTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAG 7624 ||| || || || || || | | ||||| |||||| | |||||||| | | | |||| Sbjct 38361 GTATAATAACAGCACACGCTATAATGATGATATTCTTTATGGTTATGCCTGCTTTAATAG 38420 Query 7625 GCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAA 7684 | |||||||| |||| || | |||||| | | || | ||| |||||||| ||||| | Sbjct 38421 GAGGTTTCGGTAATTTCTTATTACCTTTATTAGTAGGAGGTCCAGATATGGCATTTCCTA 38480 Query 7685 GGCTTAACAATATAAGTTTTTGATTACTA 7713 | | || ||||||||||| |||||| || Sbjct 38481 GATTAAATAATATAAGTTTCTGATTATTA 38509 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||||||||| ||||| ||||||||||||||||| | | |||||||| ||||| || | Sbjct 10620 TTCAGGATGTCCAAAGAATCAGAATAAATGTTGGAATAATATAGGATCACCTCCACCAGC 10561 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAA 370772 | || || || |||||||||||||||||| ||||||| Sbjct 10560 TACTTCGAAGAATGAAGTATTAAAATTTCTATCTGTTAAAA 10520 >seq27 Length=4901019 Score = 98.7 bits (108), Expect = 2e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| ||| || || | ||||| || |||||||| || |||||||| Sbjct 3950621 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 3950680 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || ||||| || ||||| || |||||||| |||||||| ||| || ||| Sbjct 3950681 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 3950740 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 |||||||| | || ||||| | || || ||||| ||||||| || || | ||| Sbjct 3950741 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 3950799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192530252683028